Shigella flexneri NCTC1 (serotype 2a): NCTC1_02697
Help
Entry
NCTC1_02697 CDS
T03751
Symbol
yfgF_1
Name
(GenBank) cytochrome C-type biogenesis protein,Cyclic di-GMP phosphodiesterase YfgF,RNase II stability modulator,Predicted signal transduction protein containing sensor and EAL domains,EAL domain
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NCTC1_02697 (yfgF_1)
Enzymes [BR:
sft01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NCTC1_02697 (yfgF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
MASE1
GGDEF
Motif
Other DBs
NCBI-ProteinID:
CDX07864
UniProt:
A0AB33SFA7
LinkDB
All DBs
Position
1:complement(2478932..2480449)
Genome browser
AA seq
505 aa
AA seq
DB search
MLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGNLRYPFLNLTWAVSTLCLLNYNQNFLQG
VETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP
EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV
LSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ
SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILA
RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL
LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT
GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ
QALLHKLGVQYLQGYLIGRPQPLAD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctacttctgttgtgcacaccttatgaaaacgactttattgccggttacctggta
cccgttttcttcatcatctttaccctcggggtcggtaatcttcgctatccgtttttaaat
ctcacctgggctgtttcaacgctttgccttctgaattacaatcagaactttttgcaaggg
gtggaaaccgaatattcgctggcatttattctcgcggtgctgatttcctttagcgtttgc
ctgctctatatggtgcgcatttatcatcgcagtgaatggcttaatcgccgctggcatttg
caggcgctaacagatccgttaacgctcctacccaactttcgtgcgttggaacaagcgccg
gagcaagaggcgggcaagagtttttgctgcctgcgcattgataatcttgagtttatgagt
cgtcattacggcttaatgatgcgcgttcactgtatccgctcaatttgccgtacgctgctg
ccgttgatgcaggaaaacgaaaagttgtatcaattgccgggtagtgaactgctgttagtg
ctgagcgggccggaaacggaagggcgactccagcatatggttaacatcctgaatagtcgg
caaattcactggaacaataccgggctggatatgggctatggtgctgcctgggggcgtttt
gatggaaatcaggaaaccctgcaacccttgttggggcagttaagctggctggcggagcaa
tcctgcgcacatcatcatgtgctggcgctggatagcagagaggagatggtttccgggcag
accactaaacaggtgctattgctgaataccattcgcacggcgttagatcagggtgatttg
ctgctctacgcccagccaattcgcaacaaagagggtgaaggttatgatgagatcctcgcg
cgactgaaatatgacggcggcattatgaccccggataagtttctgccccttattgctcag
tttaaccttagcgcgcgttttgatttgcaagtgctggaatccttgttgaagtggctggca
acacacccttgcgacaaaaaaggaccgcgcttttcagtcaatttaatgccgctcacgctg
ctgcaaaagaatattgccgggcggattattcgtctgtttaagcgttatcacatctccccg
caggcggtcattcttgagatcaccgaggagcaggcgttttctaacgcagaaagcagcatg
tacaacatcgagcagctgcataagtttggtttccggattgcgattgatgactttggcacc
ggatatgccaactacgaacggttaaagcgtttgcaggctgatatcatcaaaattgatggc
gtctttgtgaaagatattgtcacgaatacgctggatgcgatgattgtgagatcaattacc
gatctggcgaaagcgaagtcattgagtgtggtcgcggagtttgtcgagacgcaacagcag
caggcgctattgcataagctcggggtgcaatatctgcaagggtatttgattggtcgcccg
cagccattagctgattaa
DBGET
integrated database retrieval system
