Shigella flexneri NCTC1 (serotype 2a): NCTC1_02860
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Entry
NCTC1_02860 CDS
T03751
Symbol
qseF_2
Name
(GenBank) sigma-54 dependent response regulator,Quorum-sensing regulator protein F,response regulator GlrR,Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains,nitrogen regulation protein NR(I),Sigma-54 interaction domain
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft02020
Two-component system
sft02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC1_02860 (qseF_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC1_02860 (qseF_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sft02022
]
NCTC1_02860 (qseF_2)
Two-component system [BR:
sft02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
NCTC1_02860 (qseF_2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA
AAA_2
HTH_8
Glycos_transf_1
AAA_16
AAA_3
FAD_binding_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CDX08018
UniProt:
A0A658Y9I4
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All DBs
Position
1:complement(2634062..2635396)
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AA seq
444 aa
AA seq
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MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMD
EMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDA
LEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNA
SPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDM
PAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLSKAMARGEFREDLYYRLNVV
SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVI
EQCVALTSSPVISDALVEQALEGENTALPTFVEARNHFELNYLRKLLQITKGNVTHAARM
AGRNRTEFYKLLSRHELDANDFKE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagccataaacctgcgcatttattattggtcgatgacgatccgggattgctgaaactg
cttggcctgcgcctgaccagcgaaggctacagtgtggtcacggcggaaagtggcgctgaa
ggattacgggtactgaatcgcgaaaaagtagatttagttatcagcgacctgcggatggat
gaaatggacggtatgcagctatttgctgaaatccagaaagtgcagccgggaatgccagta
attattcttactgcgcatggttctatccccgatgccgttgctgcaacacagcagggcgtt
tttagtttcctcaccaagcctgtcgataaagatgcgctatatcaggcaattgacgatgcg
ctggagcaatccgcgccagccaccgatgaacgctggcgcgaggcaattgtcacccgcagc
ccgctgatgctgcgtttgctggaacaggcgcggctggtggcgcaatcagacgtcagcgtt
ttgattaacggtcagagcggcaccgggaaagagattttcgcccaggctatccacaacgcc
agcccgcgcaacagcaaaccatttattgctattaactgtggcgcattgcccgagcaattg
ctggagtcggagctgtttggtcatgcgcgtggcgcgtttactggcgctgtcagcaatcgc
gaaggtttattccaggcggcggaaggcggaacgctatttctcgatgaaattggcgatatg
cctgcgccgttacaggtcaaactgctgcgcgtgttgcaggagcgtaaagtgcgcccgctg
ggcagtaaccgcgatattgatatcaatgtgcggattatttctgccactcaccgtgatctg
tcaaaagcgatggcgcgcggggaattccgcgaagatctctattaccgcctcaacgttgtc
agcctgaaaattccggcactggcggagcgcacagaagacattccgctactggcaaatcac
ctgttgcgccaggcggcagagcgacataaaccgtttgtccgcgcgttctctaccgatgcg
atgaaacgcctgatgaccgcgagctggccgggtaatgtgcgccagttggtcaacgtgatt
gaacagtgcgtggcgctgacctcatctccggtgattagtgatgcgctggtggagcaggcg
ctggagggtgaaaatacggcgctgccaacctttgttgaggcacgtaatcattttgaactc
aactacttgcgtaagctgctgcaaatcaccaaaggcaacgtcacccacgcggcgagaatg
gcggggcgcaaccggacagaattttataaactgctttcccgacacgagctggatgcaaac
gatttcaaggaatga
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