Shigella flexneri NCTC1 (serotype 2a): NCTC1_02904
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Entry
NCTC1_02904 CDS
T03751
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase,Uracil-DNA glycosylase,uracil-DNA glycosylase,uracil-DNA glycosylase,Uracil DNA glycosylase superfamily
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC1_02904 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sft03400
]
NCTC1_02904 (ung)
Enzymes [BR:
sft01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCTC1_02904 (ung)
DNA repair and recombination proteins [BR:
sft03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC1_02904 (ung)
Prokaryotic type
NCTC1_02904 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CDX08059
LinkDB
All DBs
Position
1:2675519..2676208
Genome browser
AA seq
229 aa
AA seq
DB search
MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVI
LGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVL
LLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRH
HVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVLPAECE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaattaacctggcatgacgtgctggctgaagagaagcaacaaccttatttt
cttaatacccttcagaccgtcgccagcgagcggcagtccggcgtcactatctatccacca
caaaaagatgtctttaacgcgttccgctttaccgagttgggtgacgttaaagtggtgatt
ctcggccaggatccttatcacggaccgggacaggcgcatggtctggcattttccgttcgt
cccggcattgccattcctccgtcattattgaatatgtataaagagctggaaaatactatt
ccgggcttcacccgccctaatcatggctatctcgaaagctgggcgcgtcagggcgttctg
ctgctcaatactgtgttgacggttcgcgcaggtcaggcgcattcccacgccagcctcggt
tgggagacgtttactgataaagtcatcagcctgattaaccagcaccgcgaaggcgtggtg
tttttgttgtggggatcacatgcgcaaaagaaaggggcgattatagataagcaacgccat
catgtactgaaagcaccgcatccgtcgccgctttcggcgcatcgtggattctttggctgc
aaccattttgtgctggcaaatcagtggctggaacaacgtggcgagacgccgattgactgg
atgccagtattaccggcagagtgtgagtaa
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