Shigella flexneri NCTC1 (serotype 2a): NCTC1_02917
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Entry
NCTC1_02917 CDS
T03751
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine synthase D,Ribosomal large subunit pseudouridine synthase D,23S rRNA pseudouridine synthase D,pseudouridine synthase, RluA family,RNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sft03009
]
NCTC1_02917 (rluD)
Enzymes [BR:
sft01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NCTC1_02917 (rluD)
Ribosome biogenesis [BR:
sft03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC1_02917 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
CDX08070
UniProt:
A0A380A036
LinkDB
All DBs
Position
1:2692614..2693594
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AA seq
326 aa
AA seq
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MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL
GGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT
AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM
AHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAP
IPQDMVELIEVMRADFEEHKDEVDWL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacgagtacagctcactgcaacggtgtccgaaaaccaactcggtcaacgctta
gatcaggctttggccgaaatgttcccggattattcacgttcgcgaataaaagaatggatc
ctcgaccagcgcgtgctggtaaacggcaaagtttgtgataagccgaaagaaaaagtattg
ggtggcgagcaggttgccatcaacgctgagattgaagaagaagcgcgttttgaaccgcag
gatatccctctggatatcgtctatgaagatgaagatatcatcgtcattaataaaccgcgc
gacctagtggtacatcctggcgcgggtaacccggatggcacggtactgaatgcgttgctt
cattactatccgcccattgccgatgtaccacgtgcgggcatcgtccatcgtctggataaa
gacaccactggcctgatggttgtggcaaaaaccgttccggctcagacgcgtttagtcgaa
tctttgcaacggcgtgaaattactcgtgagtatgaagcggtggcgattggtcatatgacc
gctggcggtacagtagatgaacccatcagccgccacccgaccaaacgtactcacatggcg
gtgcatccgatgggcaaaccggcggtgactcactatcgcatcatggaacacttccgtgtg
cacacgcgtctgcggttgcgtctggaaactggacgtacgcaccagatccgcgtgcatatg
gcccatatcactcatccgctggtgggcgatccggtttatggtggccgtccgcgtccgcca
aaaggtgcttcggaagcatttatctccacgctgcgtaagtttgaccgccaggcgcttcat
gcaaccatgctgcgtctttatcacccgatctccggcatcgaaatggaatggcatgcgcct
attccacaagatatggtggagctgattgaggtgatgcgcgccgatttcgaagagcataag
gatgaagtggactggttatga
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