Shigella flexneri NCTC1 (serotype 2a): NCTC1_02952
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Entry
NCTC1_02952 CDS
T03751
Name
(GenBank) alpha amylase,Alpha amylase, catalytic domain
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
Motif
Other DBs
NCBI-ProteinID:
CDX08102
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Position
1:2721916..2724168
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AA seq
750 aa
AA seq
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MFSIKPGPGNLPIDNPTLLSWNITDGDLNSKFNTLEYLNCITNIINACGVYPQDLKDREI
ISTFHAEKVINDLLKNDYKISLSPDTTYRELNKAAQSSITAPDRIGEGKTWVYQRDTMVE
RGDNSGVHQYGPAEHFTHIISDKPSPKDKYVAYAINIPDYELAADVYNINVTSPSGQQET
FKILINPEHLRQTLERKSLTAVQKSQCEIITPKKPGEAILHAFNATYQQIRENMSEFARS
HYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPEDLCTIHNPMGDLQDFIALVKDAKKF
GIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKISKDIESGIPGYWQGQVLIPFIKDPVT
KERKQIHPEDIHLTAKDFEASKDNISKDEWKNLHALKEKSLNGMPKTTPKSDQVIMLQNQ
YVREMRKYGVRGLRYDAAKHSKHEQIERSITPPLKNYNERLHNTNLFNPKYHEKTVMNYM
EYLVTCQLNEEQMSSLLYERDDLSAIDFSLLMKTIKAFSFGGDLLTLASKPGSTISSIPS
ERRILININHDFPNNGNLFNDFLFNHQQDEQLAMAYMAALPFSRPLVYWDGQVLKSTTEI
KNYDGSTRVGGEAWLNKGCSTYQQLYNEFHALYIDKAGIWSAFEGVFATKNVLAFSRGDS
VNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPCKVFT
LRGGSLNINIPRRSALLLGKTGEPPNYLYL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgttttctataaaaccaggacctggaaatttacctatcgacaaccccacattgttatca
tggaacattactgatggggatctaaattccaaatttaatacattagaatatctaaactgt
ataacaaatattattaatgcttgtggagtttatcctcaggatttaaaagacagagaaatt
atatcaacttttcacgcagaaaaagtcattaatgatctgttaaaaaacgattataaaatt
tccctttctccagatacaacttaccgagagctgaataaagctgcacagagtagcattaca
gcgccagacaggataggagaagggaaaacatgggtttatcaacgagatacaatggttgaa
agaggtgataacagtggtgttcatcagtatggtccagctgaacatttcactcacattata
tctgacaaaccgtccccaaaagataagtatgttgcatatgctattaacattcctgactat
gagctagcagccgatgtatataatattaacgtgacgtcaccttccggacagcaagaaaca
tttaaaatactaatcaatccagaacatctacggcaaacacttgagcgtaaatctcttact
gctgttcagaaatcacaatgtgaaatcatcacccccaaaaaacctggcgaagcgattctt
catgcttttaatgccacctaccagcaaatcagggaaaatatgtctgagtttgcacgttcc
cattatgggtatatacaaatccctccagtgacaactttccgcgccgacggaccagaaact
cccgaagaagaaaaaggttactggtttcacgcttatcaacccgaagatctttgtaccatc
cataatccaatgggggatttgcaggattttatcgcattggttaaagatgctaaaaaattt
ggtatcgatatcattcctgattatacctttaactttatgggaatcgggggaagtggtaaa
aatgacctggattatccctctgctgatatacgagcgaagatcagtaaagatatagaaagt
ggtatccctggctattggcaaggtcaggttttgattccattcattaaagatccagtaaca
aaagaacgtaaacaaatccatccagaagatatacatctcactgcaaaagacttcgaagca
agtaaagataacatctctaaggatgaatggaaaaacctccatgcattaaaagaaaagagt
ttaaatggaatgcctaaaacaacccccaaaagtgaccaggttattatgttgcaaaatcaa
tacgttcgtgaaatgcgaaaatatggcgtacgaggtttacgttatgatgcagcaaaacac
tcaaaacatgaacaaatagaaagatcaataaccccaccgcttaaaaattataatgagcga
ttacacaatactaacttatttaacccaaaatatcatgaaaaaaccgttatgaattacatg
gaatatctggtaacttgtcagttgaatgaagaacaaatgtcatcgctgctttatgaaaga
gatgatttaagcgccattgatttttcattgctcatgaagacgataaaagccttttcattc
gggggagatctcctaacccttgcatcaaaaccgggttccacaatctcaagcatcccatca
gaaagacggatattgattaacattaaccacgattttcctaacaatggcaatcttttcaat
gactttctatttaaccatcaacaagatgaacaattagcaatggcatatatggccgctctc
ccgttcagcaggcctttagtttactgggatggccaggtattaaaatcaacgactgaaatt
aaaaattatgatgggtccacgcgtgtcggtggtgaggcgtggcttaataaaggttgctct
acctatcagcagctctacaatgaattccacgcattatatatagataaagcaggaatatgg
agcgcatttgagggtgtatttgcaactaaaaacgttctggcctttagtcgtggggattct
gtgaacattaatcactctcctcatgatggactagttataataaataaaggaaacgaagaa
gttgaaggtacctggcctaacaaattgcaacctggaatatataaaaacatggggagtaat
agcgttaacattattattaataatacccgaaaaattatccccccttgtaaagtatttacg
cttagaggcggatctctaaatatcaatattcctaggcgtagcgctcttcttttagggaaa
acaggagaaccgccgaactatctctatttataa
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