Shigella flexneri NCTC1 (serotype 2a): NCTC1_03104
Help
Entry
NCTC1_03104 CDS
T03751
Symbol
gcvA
Name
(GenBank) DNA-binding transcriptional activator GcvA,Gcv operon activator,DNA-binding transcriptional activator GcvA,ABC-type uncharacterized transport system, periplasmic component,putative choline sulfate-utilization transcription factor,LysR substrate binding domain
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sft03000
]
NCTC1_03104 (gcvA)
Transcription factors [BR:
sft03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NCTC1_03104 (gcvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
CDX08246
UniProt:
A0A9P2IUL2
A0A0H2VXG0
LinkDB
All DBs
Position
1:complement(2864883..2865800)
Genome browser
AA seq
305 aa
AA seq
DB search
MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAY
PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPL
KTPEDLAKHTLLHDASRRDWQTYTRQLGFNHINVQQGPIFSHSAMVLQAAIHGQGVALAN
NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFR
FRYEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgattaccaccgctaaatgccttacgagtttttgatgccgcagcacgccat
ttaagttttactcgcgcagcagaagagctttttgtgacccaggccgcagtaagtcatcaa
atcaagtctcttgaggattttttggggctaaaactgttccgccgccgtaatcgttcactc
ctgctgaccgaggaagggcaaagctatttcctcgatatcaaagagatattttcgcaatta
accgaagcgacgcgtaaactccaggcccgtagcgccaagggggcgttgacggtcagttta
ctccccagtttcgccattcattggttggttccgcgactttccagctttaattcagcttat
ccgggaattgacgttcgaatccaggcggttgatcgtcaggaagataagctggcggatgat
gttgatgtggcgatattttatggtcggggcaactggccggggctacgggtggaaaaactg
tacgccgaatatttattgccggtgtgttcgccgctactgctgacaggcgaaaaacccttg
aagaccccggaagatctggctaaacatacgttattacatgatgcgtcacgccgtgactgg
cagacatatacccgacagttggggtttaatcatatcaacgttcagcaagggccaattttt
agtcatagcgccatggtgctgcaagcggctattcacgggcagggagtggcgctggcaaat
aacgtgatggcgcaatctgaaatcgaggccggacgtcttgtttgcccgtttaatgatgtt
ctggtcagtaaaaatgctttttatctggtttgtcatgacagccaggcagaactgggtaaa
atagccgcctttcgccaatggatcctggcgaaagccgctgctgaacaagaaaaattccgc
tttcgttatgaacaataa
DBGET
integrated database retrieval system