Shigella flexneri NCTC1 (serotype 2a): NCTC1_03169
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Entry
NCTC1_03169 CDS
T03751
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD,Tyrosine recombinase XerD,site-specific tyrosine recombinase XerD,Site-specific recombinase XerD,tyrosine recombinase XerD,Phage integrase family
KO
K04763
integrase/recombinase XerD
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sft03036
]
NCTC1_03169 (xerD)
Chromosome and associated proteins [BR:
sft03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NCTC1_03169 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF2064
Motif
Other DBs
NCBI-ProteinID:
CDX08305
UniProt:
A0AB33SQ40
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All DBs
Position
1:complement(2934294..2935190)
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AA seq
298 aa
AA seq
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MKQELARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA
ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER
LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP
LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaggagctggcacgcatcgagcagtttcttgatgctctgtggctggaaaaaaat
ctggctgaaaatacgttgaacgcttaccgtcgcgatctgtcaatgatggtggagtggttg
catcaccgcgggttgacgctggcgacggcgcaaagtgacgatttgcaggcattactggca
gaacggctggagggcgggtataaagccaccagctcagcgcgtttgctgagtgcagtgcgc
cgattgttccagtatctttatcgcgaaaagtttcgtgaagacgatcccagtgcgcatctc
gcttcaccgaaattgccccagcgtttgccaaaagatttaagcgaagcgcaggtcgaacgt
ttattacaggcgccattaattgatcagccactggagctacgcgataaagccatgcttgaa
gtgttgtatgctaccgggctgcgtgtctctgaactggtcgggctgacaatgagtgatatc
agcctgcgtcagggcgtagtgcgggtcattggtaaaggcaacaaagagcgcctggtgccg
ttaggggaagaggcggtttactggctggaaacctatctggaacatgggcgtccgtggctg
ctgaatggtgtgtcaattgacgtgttgtttcccagccagcgtgcgcagcagatgacgcga
cagaccttctggcaccgcattaaacattatgccgtgctggcgggtatcgacagcgaaaag
ctgtcaccgcatgtgttgcgtcacgcttttgccactcatttattaaatcatggtgcggat
ttacgcgtggtgcagatgctactgggccacagcgatctttccaccacgcaaatttatacg
catgtcgctaccgagcgtctgcggcaacttcatcaacagcatcacccgcgggcgtga
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