Shigella flexneri NCTC1 (serotype 2a): NCTC1_03173
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Entry
NCTC1_03173 CDS
T03751
Symbol
ygfZ
Name
(GenBank) putative global regulator,tRNA-modifying protein ygfZ,putative global regulator,Glycine cleavage system T protein (aminomethyltransferase),folate-binding protein YgfZ,Aminomethyltransferase folate-binding domain
KO
K06980
tRNA-modifying protein YgfZ
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sft03016
]
NCTC1_03173 (ygfZ)
Transfer RNA biogenesis [BR:
sft03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
NCTC1_03173 (ygfZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
DUF6237
Sortase
Motif
Other DBs
NCBI-ProteinID:
CDX08309
UniProt:
A0A2A2XI30
LinkDB
All DBs
Position
1:2936760..2937740
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AA seq
326 aa
AA seq
DB search
MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLA
AHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGV
AGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGE
AELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKF
RGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDM
EPDSIFRVRDDANTLHIEPLPYSLEE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacaccttttcctccacgtcagcctacggcttctgcccgtttaccgctgacg
ctgatgacgcttgatgactgggcgcttgccaccattactggcgcggacagcgaaaaatat
atgcagggtcaggtgacagcagatgtcagccagatggcagaagatcagcacctgctcgcc
gcccattgcgacgccaaaggtaaaatgtggagcaatttacgtctgttccgcgacggcgat
ggctttgcatggattgaacggcgcagcgtgcgtgaaccgcagctgactgaactgaaaaaa
tatgcggtattctctaaagtgaccatcgcgccagacgacgagcgtgtgctgcttggtgtt
gccggttttcaggcgcgcgccgcgctggcaaatctctttagcgaactgccttcgaaagaa
aaacaggtagtcaaagaaggcgcgaccactttgctatggtttgaacacccggcagaacgt
ttcctgatcgtaaccgatgaagctactgctaatatgctgaccgataaactgcgcggtgaa
gcggaactgaacaatagccaacagtggctggcattaaacattgaagctggtttcccggtg
attgatgccgccaacagcgggcagtttatcccacaggcgaccaatctccaggcgctgggc
ggtatcagctttaagaaaggctgttataccggacaagagatggtggcgcgagcaaaattc
cgtggtgccaacaaacgcgcgctctggttgctggcaggtagtgccagccgactgccggaa
gctggtgaagacttagagctgaaaatgggcgagaactggcgtcgtaccggtacggtgctg
gctgcggtaaaactggaagatggtcaggtcgtggtacaggtcgtcatgaataacgatatg
gaaccggacagcatcttccgcgtacgcgacgatgcgaatacactgcatatcgagccgctg
ccgtattcgctcgaagagtaa
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