Shigella flexneri NCTC1 (serotype 2a): NCTC1_03212
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Entry
NCTC1_03212 CDS
T03751
Symbol
yggD
Name
(GenBank) DNA-binding transcriptional regulator,hypothetical protein,putative DNA-binding transcriptional regulator,Mannitol repressor
KO
K01774
fumarate hydratase E [EC:
4.2.1.2
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft00020
Citrate cycle (TCA cycle)
sft00620
Pyruvate metabolism
sft00720
Other carbon fixation pathways
sft01100
Metabolic pathways
sft01110
Biosynthesis of secondary metabolites
sft01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NCTC1_03212 (yggD)
00620 Pyruvate metabolism
NCTC1_03212 (yggD)
09102 Energy metabolism
00720 Other carbon fixation pathways
NCTC1_03212 (yggD)
Enzymes [BR:
sft01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
NCTC1_03212 (yggD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MtlR
Motif
Other DBs
NCBI-ProteinID:
CDX08345
UniProt:
Q83Q96
Structure
PDB
PDBj
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All DBs
Position
1:complement(2973447..2973956)
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AA seq
169 aa
AA seq
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MATLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVDNDEEIVEYAVKPLLAQ
SGPLDDIDVALRLIYALGKMDKWLYADITHFSQYWHYLNEQDETPGFADDITWDFISNVN
SITRNATLYDALKAMKFADFAVWSEARFSGMVKTALTLAVTTTLKELTP
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctgacagaagatgatgtgcttgagcaactggatgcacaggacaatttattt
tcatttatgaaaactgcgcattctattttgctccaggggatacgccagtttctgccgtcg
ctgtttgtcgataacgatgaagagatcgtcgaatatgcagtgaagccgttactcgcccaa
agcggcccgcttgacgatattgatgttgcgctgcgtttgatttatgcgctggggaaaatg
gataaatggctgtatgccgatatcacgcacttttcccagtactggcattacctgaacgaa
caggatgaaacgcccggatttgccgatgatataacctgggattttatcagcaatgtcaac
agtataactcgcaatgcgacgctctacgatgcgttaaaagcgatgaagttcgccgatttc
gccgtctggtcagaggcgcgttttagcggaatggtcaaaacggcgctgacgctggcagta
acgaccaccttaaaggaattaacgccgtga
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