Shigella flexneri NCTC1 (serotype 2a): NCTC1_03222
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Entry
NCTC1_03222 CDS
T03751
Symbol
speA
Name
(GenBank) arginine decarboxylase,Biosynthetic arginine decarboxylase,arginine decarboxylase,Diaminopimelate decarboxylase,arginine decarboxylase,Pyridoxal-dependent decarboxylase, pyridoxal binding domain
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft00330
Arginine and proline metabolism
sft01100
Metabolic pathways
sft01110
Biosynthesis of secondary metabolites
Module
sft_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
NCTC1_03222 (speA)
Enzymes [BR:
sft01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
NCTC1_03222 (speA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
CDX08355
UniProt:
A0AB33SHA9
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All DBs
Position
1:complement(2983858..2985834)
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AA seq
658 aa
AA seq
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MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWWGNNYYDVNELGHISVC
PDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDY
FLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYI
RLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQGSGKWQSSGGEK
SKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKL
GVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITE
SGRAVTAHHTVLVSNIIGVERNEYTVPTAPVEDAPRALQSMWETWQEMHEPGTRRSLREW
LHDSQMDLHDIHIGYSSGTFSLQERAWAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQER
MADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDG
DGIATTMPMPEYDPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELS
DEGDTVADMLQYVQLDPKTLLTQFRDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacatgtctatgggtttgccttcgtcagcgggcgaacacggtgtactacgc
tccatgcaggaggttgcaatgagctcccaggaagccagcaagatgctgcgtacttacaat
attgcctggtggggcaataactactatgacgttaacgagctgggccacatcagcgtgtgc
ccggacccggacgtcccggaagctcgcgtcgatctcgcgcagttagtgaaaactcgtgaa
gcacagggtcagcgtctgcctgcactgttctgtttcccacagatcctgcagcaccgtttg
cgttccattaacgccgcgttcaaacgtgcgagggaatcctacggctataacggcgattac
ttccttgtttatccgatcaaagttaaccagcaccgccgcgtgatcgagtccctgattcat
tcgggtgaaccgctgggtctggaagccggttccaaagccgagttgatggcagtgctggca
catgctggcatgactcgtagcgtcatcgtctgcaacggttataaagaccgcgaatatatc
cgcctggcattaattggcgagaagatggggcacaaggtctatctggtcattgagaagatg
tcagaaatcgccattgtgctggatgaagcagaacgtctgaatgtcgttcctcgtctgggc
gtgcgtgcacgtctggcttcgcagggctcgggtaaatggcagtcctccggcggggaaaaa
tcgaagttcggcctggctgcgactcaggtactgcaactggttgaaaccctgcgtgaagcc
gggcgtctcgacagcctgcaactactgcacttccacctcggttcgcagatggcgaatatt
cgcgatatcgcgacaggcgttcgtgaatccgcgcgtttctatgtggaactgcacaagctg
ggcgtcaatattcagtgcttcgacgtcggcggcggtctgggcgtggattatgaaggcacc
cgttcgcagtctgactgctccgtaaactatggcctcaatgaatacgccaacaacatcatc
tgggcgattggcgatgcgtgtgaagaaaatggtctgccgcatccgacggtaatcaccgaa
tcgggccgtgcggtgactgcgcaccataccgtgctggtgtcgaatatcatcggcgtggaa
cgtaacgaatatacggtgccgaccgcgcccgtagaagatgcgccgcgtgcgctgcaaagc
atgtgggaaacctggcaggaaatgcacgaaccgggaactcgccgttctttgcgtgaatgg
ttacacgacagccagatggatctgcacgacattcatatcggctactcttccggcaccttt
agcctgcaagaacgtgcatgggcagaacaactctatctgagcatgtgccatgaagtgcag
aagcaactggatccgcaaaaccgtgcgcatcgtccgataatcgacgaactgcaggaacgt
atggcggacaaaatgtacgtcaatttctcgctgttccagtcaatgccggacgcatggggg
atcgaccagttgttcccggttctaccgctggaagggctggatcaagtgccggaacgtcgc
gctgtgctgctggatattacctgtgactctgacggtgctatcgaccactatattgatggt
gatggtattgccacgacaatgccaatgccggagtacgatccagagaatccgccgatgctc
ggtttctttatggtcggtgcatatcaggagatccttggcaatatgcacaacctgttcggt
gataccgaagcagttgacgtgttcgtgttccctgacggtagcgtagaagtagaactgtct
gacgaaggcgataccgtggcggacatgctgcaatatgtacagctcgatccgaaaacgctg
ttaacccagttccgcgatcaagtgaagaaaaccgatcttgatgctgaactgcaacaacag
ttccttgaagagttcgaggcaggtttgtacggttatacttatcttgaagatgaataa
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