Shigella flexneri NCTC1 (serotype 2a): NCTC1_03358
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Entry
NCTC1_03358 CDS
T03751
Symbol
ttdR
Name
(GenBank) putative LYSR-type transcriptional regulator,D-malate degradation protein R,transcriptional activator TtdR,ABC-type uncharacterized transport system, periplasmic component,putative choline sulfate-utilization transcription factor,LysR substrate binding domain
KO
K21742
LysR family transcriptional regulator, transcriptional activator for ttdABT operon
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sft03000
]
NCTC1_03358 (ttdR)
Transcription factors [BR:
sft03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NCTC1_03358 (ttdR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
ParM_N
ASXH
Motif
Other DBs
NCBI-ProteinID:
CDX08485
UniProt:
A0A658YAB5
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All DBs
Position
1:complement(3107159..3108160)
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AA seq
333 aa
AA seq
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MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGV
ALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMR
NYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYP
QPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKG
IMLRSEWDVLPFLESGKLVQVLPEYAQSANIWAVYRELLYRSMKFVSARNFWRHGASNGW
ASPMKAIRSCRSTRNHSGSFSRFLLNFVQIFVS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatagctggcctttagccaaagacttgcaggtactggtagaaatcgtccacagc
gggagttttagtgctgcagcggcgacgcttgggcaaacgcctgcatttgtcaccaagcgg
atccaaatccttgaaaatacgctggcaacaacgctgctgaaccgctccgctcgcggcgtg
gcgctgactgaaagtggccaacgttgttacgaacatgcgctggaaatcctcacccaatat
cagcgactggtcgatgacgtcacgcaaatcaaaacgcgcccggaggggatgattcgtatt
ggttgcagttttggttttgggcgcagccatattgcgccagccattaccgaacttatgcgc
aattatcctgagttacaggtgcattttgaattgttcgatcggcaaattgatttagtgcag
gataatattgatctggatattcgtattaatgacgaaattcctgattattatattgcgcat
ctgttaacgaaaaataaaagaatattatgcgcagcacctgagtatctgcaaaaatatccg
cagccacaatcattacaggaattaagtcgtcatgactgtctggtgaccaaagagcgcgat
atgacccacggaatatgggagttggggaacggtcaggagaaaaaatcggtgaaggttagc
gggcatctttcctccaatagcggcgagatagtgttgcaatgggcgctggagggcaaaggg
attatgctgcgttccgagtgggatgtgttgccgtttctggagagtggcaaactggtgcaa
gtattgccggagtatgcacaaagcgccaatatctgggctgtttaccgggagctgctctat
cgcagcatgaaattcgtgtctgcgcggaatttctggcggcatggtgccagcaacggctgg
gcaagcccgatgaaggctatcaggtcatgtagatccaccagaaatcactcgggatccttt
tcgcgctttcttttgaatttcgtccagatttttgtctcctga
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