Shigella flexneri NCTC1 (serotype 2a): NCTC1_03452
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Entry
NCTC1_03452 CDS
T03751
Symbol
fimD_2
Name
(GenBank) outer membrane protein,Outer membrane usher protein fimD precursor,long polar fimbrial outer membrane usher protein LpfC,Fimbrial Usher protein
KO
K07347
outer membrane usher protein
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC1_03452 (fimD_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sft02000
]
NCTC1_03452 (fimD_2)
02044 Secretion system [BR:
sft02044
]
NCTC1_03452 (fimD_2)
02035 Bacterial motility proteins [BR:
sft02035
]
NCTC1_03452 (fimD_2)
Transporters [BR:
sft02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC1_03452 (fimD_2)
Secretion system [BR:
sft02044
]
Chaperone-usher system
Type 1 pilus assembly protein
NCTC1_03452 (fimD_2)
Bacterial motility proteins [BR:
sft02035
]
Pilus system
Fimbrial proteins
NCTC1_03452 (fimD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
Motif
Other DBs
NCBI-ProteinID:
CDX08576
UniProt:
A0A658Z4N3
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All DBs
Position
1:3194948..3196759
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AA seq
603 aa
AA seq
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MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTT
DLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDE
IPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDARGYVSPSRWDDGI
PTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQASSWNTISS
YLQRDIKALKSQLLLGESATSGSIFSSYAFTGVQLASDDNMLPNSQRGFAPTVRGIANSS
AIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMM
QRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIGI
GGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYF
SFDEANTRNWGYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNEKNSNISVGVSGQ
QWGIGYSLNYQYSRYTDENNDRALSLNLSIPLERWWICPYISRHLLSLNLLQARCRRYSR
GER
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccacaacgacaccaccagggacataaacgcacaccgaaacagttggcgctcattatc
aaacgttgtttgccgatggtgctcactggcagcggcatgctttgcactaccgctaacgcc
gaagagtattatttcgaccccattatgctggaaactacaaaaagtggtatgcaaacaacc
gatctgtcacgtttttcaaaaaaatacgcacaactaccaggaacttatcaggttgatatc
tggctgaataaaaagaaggtttcacagaaaaaaattacatttaccgccaatgcagagcaa
cttctgcagccacagtttacggtagaacaactacgtgagctgggtattaaggtggatgaa
atcccggcgctggctgaaaaagatgacgatagcgtgatcaactcgcttgaacaaatcatt
cccggtacagctgctgaatttgatttcaatcatcagcgacttaatttgagcattccccaa
attgcactgtaccgtgatgcaagaggttacgtctccccttctcgttgggacgatggtata
ccaacgctgtttaccaactactcgtttacaggttctgataaccgttaccgccagggcaat
cgtagccaacgacagtacctgaatatgcaaaatggtgctaattttggcccctggcgatta
cgtaactattctacgtggacacgcaacgatcaggcgtcaagctggaacactatcagtagt
tatttacaacgtgatatcaaggcgttgaagtctcagttgcttctgggagaaagcgccacc
agcggcagtattttttccagctacgcctttactggcgtgcaactcgcttccgacgataat
atgttgccaaacagccagcgcggatttgccccaacggtacgcggtatcgcaaacagtagt
gcaatcgtgactatcaggcaaaatggttatgtgatctatcaaagcaacgtgccagcgggt
gcctttgaaattaacgatctctacccctcttccaacagcggcgatttagaagtcacgatt
gaagaaagtgacggtacacaacgtcgctttatccagccttattcttcattacccatgatg
cagcgacctgggcatctaaaatatagcgcgaccgctggacgctatcgcgctgatgcaaac
agtgatagcaaggaacccgaatttgctgaagccacggcaatatatggtttgaataatact
tttacgctgtatggcggcctgctcggttctgaagattattatgcgctggggatcggtatc
ggcggcacacttggcgcactgggcgcgttgtcgatggatatcaacagagctgacacccaa
ttcgataaccagcactcttttcatggctatcaatggcgtactcagtacatcaaagatatc
ccggaaaccaacaccaatatcgctgttagctactatcgctataccaacgatggctatttt
agttttgatgaagccaatacccgcaattggggctataacagtcgccaaaaaagtgaaatt
caattcaacatcagccagacaatatttgatggggtaagtctgtatgcctccggttcacag
caagactattggggcaataacgagaaaaacagtaatatctctgttggggtttccggccag
caatggggaattggttacagcctgaattatcaatacagccgctacactgatgaaaataat
gaccgtgcactctctttgaatctcagtattccgttagaacgctggtggatttgcccctat
atttccagacatctgttatcacttaacctattacaagcccgctgccgcagatattcccgt
ggcgagcgataa
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