KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_03518
Entry
NCTC1_03518       CDS       T03751                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54,RNA polymerase factor sigma-54,DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog,RNA polymerase sigma-54 factor,Sigma-54 factor, core binding domain
  KO
K03092  RNA polymerase sigma-54 factor
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft02020  Two-component system
sft02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sft00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NCTC1_03518 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NCTC1_03518 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sft03021]
    NCTC1_03518 (rpoN)
Transcription machinery [BR:sft03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC1_03518 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: CDX08636
UniProt: A0A658YUE3
LinkDB
Position
1:3252148..3253581
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQIDTHEEIDTRE
TQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSGDYIDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESMGDEEIDIDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN
QHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgccacagctccaa
caggcaattcgtctgttgcagttgtcgacgctggaacttcagcaggagctacagcaggcg
ctggagagtaatccgctgcttgagcaaatcgacactcatgaagaaatcgacacccgcgaa
acgcaagacagtgaaacgctggacaccgccgacgcgctcgaacaaaaagagatgccggaa
gagctgccgctcgatgccagttgggacaccatttacaccgctggtacaccatccggcacc
agcggtgactacattgacgacgagctgccggtctaccagggcgaaacgacgcagaccttg
caggattacctgatgtggcaggtcgagctgacaccgttttccgacactgaccgcgctatt
gctacctctatcgtcgatgccgttgatgaaaccggttatctgactgtcccgctggaagat
attctcgaaagtatgggcgatgaagagatcgacatcgacgaggttgaagccgtccttaag
cggatccaacggtttgacccggtcggtgtagcggcaaaagatctgcgtgactgcctgcta
atccaactctcccaattcgataagaccacgccgtggctggaagaggccagattgatcatt
agcgatcatctcgatctgttagccaatcacgacttccgcactttaatgcgcgtcacgcgt
ctgaaagaagatgtgctgaaagaagccgtcaatctgatccagtcgctcgatccgcgcccc
gggcagtcgatccagactggcgaacctgagtatgtcattccagatgtgctggtgcgtaag
cataacggtcactggacggtagaactcaacagtgacagcattccgcgtctgcaaatcaac
cagcactacgcctcgatgtgcaataacgcgcgcaacgatggtgacagccagtttatccgc
agcaatctgcaggatgccaaatggttgatcaagagtctggaaagccgtaacgatacgcta
ctgcgcgtgagtcgctgtatcgttgaacagcagcaagccttctttgagcaaggtgaagaa
tatatgaaaccgatggtactggccgatatcgcccaggctgtcgaaatgcatgaatcgacg
atatctcgcgtgaccacgcaaaaatacctgcatagtccacgaggcatttttgaactgaag
tatttcttttccagtcacgtcaataccgagggcggcggcgaagcttcctccacggcgatt
cgtgcactggtgaagaaattaatcgcggcggaaaacccagcgaaaccgttgagcgacagc
aagttaacctctttgctgtcggaacaaggtatcatggtggcacgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccagcgtaaacagctcgtttga

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