Shigella flexneri NCTC1 (serotype 2a): NCTC1_03798
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Entry
NCTC1_03798 CDS
T03751
Symbol
caf1A_3
Name
(GenBank) putative fimbrial protein remnant,F1 capsule-anchoring protein precursor,pilin outer membrane usher protein SafC,Fimbrial Usher protein
KO
K07347
outer membrane usher protein
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC1_03798 (caf1A_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sft02000
]
NCTC1_03798 (caf1A_3)
02044 Secretion system [BR:
sft02044
]
NCTC1_03798 (caf1A_3)
02035 Bacterial motility proteins [BR:
sft02035
]
NCTC1_03798 (caf1A_3)
Transporters [BR:
sft02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC1_03798 (caf1A_3)
Secretion system [BR:
sft02044
]
Chaperone-usher system
Type 1 pilus assembly protein
NCTC1_03798 (caf1A_3)
Bacterial motility proteins [BR:
sft02035
]
Pilus system
Fimbrial proteins
NCTC1_03798 (caf1A_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
Motif
Other DBs
NCBI-ProteinID:
CDX08909
UniProt:
Q7UAV2
LinkDB
All DBs
Position
1:complement(3519307..3520386)
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AA seq
359 aa
AA seq
DB search
MFYRLSLILIMALLAGQLSAQEWSFDSSQLEGNVSADTVAMFNQGEQLPGNYRVEIYLNG
EKVDVGEFPFHRPESPEEKELVPCLTVDDLIHYGIKIDKSSSDTDNKKNQCFKWNSIEGL
KVNYDFDSQRVQITVPQLYLQDKKSSLAPVSLWNEGVAAFRMVYQTNIDISKQNDNQSTT
RNSRYGRFTPGFNLGAWRFRSSVTWSKELGQSERWQRGYMWFERGINAIKSRLTLGESYT
SSEVFDSIPFRGGMLATDDAMTPPEDSYYTPVVHGIAQSEAQVIIKQNGQIIFTRSVPPG
PFALDNLPTLAVGGELDVTVRESNGEEQYFSVPFQTPAIALHEGYFKYSVMGGNIKKKV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcgactgtcattaattttgataatggccttacttgcgggtcagttaagtgcc
caggagtggtcatttgattcttcacagttggaaggaaacgttagtgcggacactgtggca
atgtttaatcagggagagcaactccccggaaattatcgtgtggaaatttatcttaacggt
gaaaaagttgatgttggggagtttccctttcatcgtccggaatcccctgaagaaaaagag
cttgttccatgtttaaccgttgatgaccttatccactatggcattaaaattgataaaagc
agcagtgatactgacaataaaaagaatcagtgttttaaatggaactctattgaaggtttg
aaagtaaattatgattttgatagccagcgcgtacagataaccgttccacaactgtatctg
caagataaaaaaagtagtttagcaccagtgtcgttatggaatgagggtgtagctgcattc
cgcatggtgtatcagacaaatattgatatttccaaacaaaatgataatcaatctaccacg
cgtaattctcgttatggcaggttcactccagggtttaatcttggtgcctggaggtttcgt
agttcagtgacatggagcaaggaacttggccagtcagaaagatggcaaaggggttacatg
tggtttgagcgaggcataaatgcgattaaaagccgattaacgcttggagaatcttatacg
tcgtctgaggtgtttgacagcataccttttcgcggcgggatgttagcgaccgacgatgcg
atgactccgccggaggacagctactacacacctgtggtgcatggaatagcacaaagtgag
gcgcaggttattattaaacaaaatgggcaaattatttttacccgttctgtgccgccaggg
ccttttgcgctggataatttaccaacgctggccgttggcggggagcttgatgttacagtg
agagagagtaatggcgaggagcagtatttttccgtgccatttcaaacgccggccatcgct
ctgcatgaaggatatttcaaatatagtgtgatgggggggaatataaagaagaaggtataa
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