Shigella flexneri NCTC1 (serotype 2a): NCTC1_03964
Help
Entry
NCTC1_03964 CDS
T03751
Symbol
rfaQ
Name
(GenBank) lipopolysaccharide core biosynthesis protein,Lipopolysaccharide core heptosyltransferase rfaQ,lipopolysaccharide core biosynthesis protein,ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase,putative lipopolysaccharide heptosyltransferase III,Glycosyltransferase family 9 (heptosyltransferase)
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft00540
Lipopolysaccharide biosynthesis
sft01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC1_03964 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sft01005
]
NCTC1_03964 (rfaQ)
Enzymes [BR:
sft01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
NCTC1_03964 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
sft01005
]
Core region
NCTC1_03964 (rfaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CDX09068
UniProt:
A0A379ZED4
LinkDB
All DBs
Position
1:complement(3688961..3689983)
Genome browser
AA seq
340 aa
AA seq
DB search
MRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNKKAKASEK
IANFFHLIKVLRANKYDLIVNLTDQWMVAILVRLLNARVKISQDYHHRQSAFWRKSFTHL
VPLQGGNVVESNLSVLTPLGLDSLVKQTTMSYPPASWKRMRRELDHAGVGQNYVVIQPTA
RQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVT
FPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYR
EMPTRDQRDRNEMYLSVIPAADVIAAVDKLLPSSTTGTSL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcatggggatatgttattaactactcccgtcattagttctctgaaaaaaaat
taccctgacgcaaaaatcgatgtgctgctttatcaggacaccatcccgatcctgtctgaa
aatccagagattaacgcgctctacggcataaaaaataaaaaagcaaaagcctcagaaaaa
attgccaacttttttcatctcatcaaggtattacgtgccaataagtatgaccttatcgtc
aatcttaccgatcaatggatggttgctatactggttcgcttattaaatgctcgtgtgaaa
atttcccaggattatcatcatcggcagtctgctttttggcgtaaaagtttcacccatttg
gtgccgttgcagggtggaaatgtggtggaaagtaacttatccgtgctgacaccattggga
cttgattcgttggtgaagcagacaaccatgagttacccgcctgcaagctggaaacgtatg
cgtcgcgaacttgatcacgctggtgttggacaaaattatgtggttatccaacctacggcg
cggcaaatcttcaaatgctgggacaacgccaagttttccgctgtgattgatgccttacat
gctcgtggttatgaagtcgttctgacgtccggcccagataaagacgatctggcctgcgtc
aatgaaattgcgcagggatgccagacgccaccagtaacggcgctggctggaaaggtgacc
ttcccggaacttggtgcgttaatcgatcatgcgcagctgtttattggcgttgattccgca
ccggcgcatattgccgctgcagttaatacgccgctgatatcgctgtttggcgcaacagat
catattttctggcgtccctggtcaaataacatgattcaattctgggcgggagattaccgg
gaaatgccaacgcgcgatcagcgtgaccgaaatgagatgtatctttcggttattccggcg
gcagatgtcattgctgctgtcgataaattactgccctcctccacgacaggtacgtcgtta
tga
DBGET
integrated database retrieval system
