Shigella flexneri NCTC1 (serotype 2a): NCTC1_04052
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Entry
NCTC1_04052 CDS
T03751
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE,tRNA modification GTPase MnmE,tRNA modification GTPase TrmE,Predicted GTPase,tRNA modification GTPase TrmE,GTP-binding protein TrmE N-terminus
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sft03016
]
NCTC1_04052 (trmE)
Transfer RNA biogenesis [BR:
sft03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NCTC1_04052 (trmE)
Prokaryotic type
Methyltransferases
NCTC1_04052 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
AIG1
ABC_tran
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CDX09153
UniProt:
A0A8B6WWC5
LinkDB
All DBs
Position
1:complement(3777585..3778949)
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AA seq
454 aa
AA seq
DB search
MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPRYADYLPFKDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVMADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacactatcgtagcccaggccacgcctccgggacgtggcggcgttggc
atcctgcgcatctccggcttcaaagcccgtgaagttgccgaaaccgtgctgggtaaactg
cctaagccgcgctacgccgattatcttccgtttaaagacgccgacggcagcgtgctcgat
caggggattgcgctatggttccctggcccgaactcgttcaccggcgaagatgtgctggaa
ctgcaaggtcatggcggtccggtgatcctcgacctgctgttaaaacgcattctgaccatt
cccggcctgcggattgctcgccctggtgagttttccgaacgcgcgtttcttaacgataaa
cttgacttagcccaggccgaggcgattgccgatcttatcgacgccagttcggaacaggcg
gcccgttcggcacttaactcgctgcaaggcgcattctccgcacgggttaatcatctggta
gaagccctcacccacttgcgcatttacgtcgaagcggcaattgatttccctgatgaagag
atcgatttcctctccgacggcaaaattgaagcccagcttaatgacgtgatggccgatctc
gatgcagtgcgtgctgaagcacgtcagggtagtttgttgcgcgaagggatgaaagtagtg
attgccggacgtcctaatgccggtaaatcgagcctgttaaacgcgctggcgggccgtgaa
gcggcaatcgtaaccgatatcgccggaaccacgcgtgacgtgctgcgtgagcatatccac
attgacggaatgccgctgcatatcatcgacactgccgggctacgtgaggccagtgacgaa
gtggaacgtattggtatcgagcgcgcgtggcaggaaattgaacaggccgaccgcgtgctg
tttatggtcgatggcaccacgacagacgccgttgatccggcagagatctggccggaattt
atcgcccgtctgcccgcgaaactgccgatcaccgtggtacgcaataaagccgatatcacc
ggcgaaacgctgggaatgagtgaagtgaacggtcacgcgttaattcgtctctcggcaagg
actggtgaaggcgtggacgtgctgcgtaaccatctcaaacagagcatgggctttgacacc
aatatggaaggcggcttcctggcgcgccgtcgccacttacaggcgctggaacaggcagcg
gagcatttgcagcaaggtaaagcgcaactgttgggagcctgggcaggtgaactgctggcg
gaagagttgcgcctggcacagcagaacttaagcgaaatcaccggggaatttacttcagac
gacctgctggggcggattttctccagcttctgtattggtaagtaa
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