KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_04125
Entry
NCTC1_04125       CDS       T03751                                 
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein GidA,Glucose-inhibited division protein A,tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA,Proteins involved in synaptic transmission and general secretion, Sec1 family,tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA,Glucose inhibited division protein A
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:sft00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sft03016]
    NCTC1_04125 (gidA)
   03036 Chromosome and associated proteins [BR:sft03036]
    NCTC1_04125 (gidA)
Transfer RNA biogenesis [BR:sft03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    NCTC1_04125 (gidA)
 Prokaryotic type
    NCTC1_04125 (gidA)
Chromosome and associated proteins [BR:sft03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    NCTC1_04125 (gidA)
SSDB
Motif
Pfam: GIDA GIDA_C_1st SAM_GIDA_C FAD_oxidored FAD_binding_2 AlaDh_PNT_C HI0933_like Pyr_redox_2 DAO Pyr_redox Thi4 NAD_binding_9 Pyr_redox_3
Other DBs
NCBI-ProteinID: CDX09223
UniProt: A0AB33SJG1
LinkDB
Position
1:complement(3845331..3847220)
AA seq 629 aa
MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVRYRQAVRTALENQPNLMI
FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS
IPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASLHPQQV
PCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK
FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRL
KSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAE
QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQISGLSNEVIAKLNDHKPASIGQ
ASRISGVTPAAISILLVWLKKQGMLRRSA
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgttttatccggatccttttgacgtcatcatcattggcgggggtcatgcaggcaccgag
gccgcgatggctgcggcgcgtatgggtcaacagactctgcttttgacacacaatatcgac
actctggggcagatgagctgcaacccggcgatcggcggtattgggaagggacatctggta
aaagaagtggatgcactcggcggtctgatggcgaaagcgatcgatcaagcgggtatccag
tttaggatactaaacgcaagcaaaggaccggcggttcgcgctacccgagctcaggcggat
cgtgtgcgctaccgtcaggcggtacgtacggcgctggagaaccaaccgaacctgatgatc
ttccagcaggcggttgaagatcttattgtcgaaaacgatcgcgtggtcggtgctgttacc
caaatgggactgaagttccgtgccaaagctgtggtgctcaccgttgggacgttcctcgac
ggcaaaattcatatcggtctggataattacagcggtggccgtgctggcgatccgccatcc
attccgctctctcgccgtttgcgtgaactgccgctgcgcgttggtcgtctgaaaaccggt
actccgccgcgtattgatgctcgaaccatcgactttagcgtgctggcgcaacagcatggc
gataacccaatgccggtattctcgtttatgggcaatgcgtccctgcatccccagcaggtg
ccgtgttatatcactcataccaacgagaaaacccatgatgtgatccgcagtaacctcgat
cgtagcccaatgtatgcaggggtgatcgaaggtgtcggcccacgctactgcccgtcgatc
gaagacaaagtcatgcgcttcgcagacagaaatcagcatcagatcttccttgaaccggaa
ggactgacctctaatgaaatttatccgaacggtatctccaccagcctgccgttcgatgtg
cagatgcaaatcgtccgctctatgcaggggatggaaaacgcgaagatcgtgcgtccgggt
tatgccattgagtatgacttcttcgatcctcgcgacctgaaaccgacgctggagagcaag
tttatccaggggctgttctttgctggtcagattaacggcactaccggttacgaagaagcc
gctgcgcaaggtttgctggccggtcttaacgctgcccgtctgtctgctgacaaagaaggt
tgggctccggcacgttctcaggcgtatctcggcgtactggttgatgacctgtgcacttta
ggaaccaaagaaccgtatcgtatgtttacttcgcgcgcagaatatcgtctgatgctgcgc
gaagataatgcggatctgcgtttgactgaaatcggtcgtgaactgggcctggtggatgac
gaacgttgggcgcgctttaacgagaaacttgagaatatcgagcgtgagcgtcagcgtctg
aaatcgacctgggtaaccccgtcggcggaagctgcagccgaagtgaatgctcacctgact
gcgccgctttcccgtgaagccagtggtgaagatctgctgcgtcgtccggaaatgacttat
gaaaaattaaccacgctgacgccgtttgcccctgcgttgacagacgaacaggcggcggaa
caggttgagattcaggttaaatacgaaggttatatcgcgcgccagcaagatgagatcgaa
aagcagctgcgtaacgagaacaccctgctacccgcgacactggattaccgccagatatcc
ggtctttctaacgaagtgatcgccaaacttaacgatcacaaaccggcctctatcggccag
gcttcgcgtatttctggcgtcacgcctgcggccatctccattctgctggtgtggctgaaa
aaacagggtatgctgcgtcgtagcgcataa

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