KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_04166
Entry
NCTC1_04166       CDS       T03751                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB,ATP-dependent RNA helicase rhlB,ATP-dependent RNA helicase RhlB,Predicted transporter component,ATP-dependent DNA helicase RecQ,DEAD/DEAH box helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sft00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC1_04166 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sft03019]
    NCTC1_04166 (rhlB)
Enzymes [BR:sft01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NCTC1_04166 (rhlB)
Messenger RNA biogenesis [BR:sft03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     NCTC1_04166 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: CDX09260
UniProt: A0A8B6WVM8
LinkDB
Position
1:complement(3888500..3889765)
AA seq 421 aa
MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcatccgaaggtt
gtagaagcccttgaaaaaaaagggtttcataactgtacgcccattcaggcactggccctt
ccgctgacgctggcgggtcgtgacgtagccgggcaggcgcaaaccggtaccgggaaaacg
atggcgtttcttacgtcaacgtttcattatcttctctctcatcctgcgattgccgatcgc
aaggtgaatcaaccgcgtgccttaattatggcaccgacgcgtgaacttgccgtgcagatc
cacgccgacgcggaaccgctggcggaagctaccggcctgaagctgggcctggcttacggt
ggtgatggctatgacaaacagctgaaagtgctggaaagcggcgttgacattctgattggc
accacgggtcgtttaattgactacgccaagcagaaccacattaacctcggtgccattcag
gtagtggtactggacgaagccgatcgcatgtacgatctaggctttattaaagatatccgc
tggctgttccgccgtatgccgcctgcaaatcagcgcctcaacatgctgttctccgccacg
ctttcgtaccgggtacgtgaactggcgttcgagcagatgaacaatgccgaatatattgaa
gtggaaccggaacagaaaacgggccaccgtattaaagaagagcttttctacccttctaac
gaagaaaaaatgcgtttgctgcaaacgctgatcgaagaagagtggccagacagagcgatt
attttcgccaataccaaacaccgttgtgaagagatctggggccacctggcggcagatggt
catcgtgtcggtttgttgacaggcgatgtcgcgcagaaaaaacgtctgcgtattcttgat
gaatttacccgtggcgatctggatattctggttgccaccgacgttgccgcgcgtggtttg
catattccggcagtgacgcacgtctttaactacgatttacccgatgactgtgaagattac
gttcaccgtattggtcgtacaggtcgcgcaggcgcaagcggtcactctatcagcctggcg
tgtgaagagtatgcattgaatttgcctgctattgagacctatattggtcactcaattccg
gtaagcaaatacaatccggacgcattgatgaccgatctgccaaaaccgctgcgcctcacg
cgcccgcgcacaggcaatggtccgcgtcgtactggcgctccgcgtaatcgtcgtcgttca
ggttaa

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