Shigella flexneri NCTC1 (serotype 2a): NCTC1_04440
Help
Entry
NCTC1_04440 CDS
T03751
Symbol
iclR
Name
(GenBank) aceBA operon repressor,Acetate operon repressor,transcriptional repressor IclR,beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family,Bacterial transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sft03000
]
NCTC1_04440 (iclR)
Transcription factors [BR:
sft03000
]
Prokaryotic type
Helix-turn-helix
IclR family
NCTC1_04440 (iclR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
MarR
HTH_Crp_2
Rrf2
HTH_20
Dimerisation
DUF7343
TrmB
Motif
Other DBs
NCBI-ProteinID:
CDX09508
UniProt:
A0A6D2Y857
LinkDB
All DBs
Position
1:complement(4157913..4158737)
Genome browser
AA seq
274 aa
AA seq
DB search
MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALTELAQQAGLPNSTT
HRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESGETV
NMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHR
KGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISI
SGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcacccattcccgcgaaacgcggcagaaaacccgccgttgccaccgcaccagcg
actggacaggttcagtctttaacgcgtggcctgaaattactggagtggattgccgaatcc
aatggcagcgtggcactcacagagctggcgcaacaagccgggttacccaattccacgacc
caccgcctgctaaccacgatgcaacagcagggtttcgtgcgtcaggtcggcgaactggga
cactgggcaatcggcgcacatgcctttatggtcggcagcagctttctccagagccgtaat
ttgttagcaattgttcaccctatcctgcgcaatctaatggaagagtctggcgaaacggtc
aatatggcggtgcttgatcaaagcgatcacgaagcgattattatcgaccaggtacagtgt
acccacctgatgcgaatgtccgcgcctatcggcggtaaattgccgatgcacgcttccggt
gcgggtaaagcctttttagcccaactgagcgaagaacaggtgacgaagctgctgcaccgc
aaagggttacatgcctatacccacgcaactctggtgtctcctgtgcatttaaaagaagat
ctcgcccaaacgcgcaaacggggttattcatttgacgatgaggaacatgcgctggggcta
cgttgccttgcagcgtgtattttcgatgagcaccgcgaaccgtttgccgcaatttctatt
tccggaccgatttcacgtattaccgatgatcgcgtgaccgagtttggcgcgatggtgatt
aaagcggcgaaggaagtgacgctggcgtacggtggaatgcgctga
DBGET
integrated database retrieval system
