Shigella flexneri NCTC1 (serotype 2a): NCTC1_04615
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Entry
NCTC1_04615 CDS
T03751
Symbol
treR
Name
(GenBank) trehalose repressor,Trehalose operon repressor,trehalose repressor,ABC-type sugar transport system, periplasmic component,trehalose operon repressor,Bacterial regulatory proteins, lacI family
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sft03000
]
NCTC1_04615 (treR)
Transcription factors [BR:
sft03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NCTC1_04615 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_3
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
HTH_Crp_2
HTH_26
CENP-B_N
MarR
TrmB
HHH
Peripla_BP_4
HTH_17
HTH_38
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
CDX09676
UniProt:
A0A658XWX2
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All DBs
Position
1:4339282..4340229
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMENQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPATLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagacatcgcgcgcttaagcggcgtggggaaatctacg
gtttcccgggtgctgaataacgaaagcggcgtgagtcagcgcacgcgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgtctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagcgttctatgaacaaggttacgatccaatcatgatggaaaat
cagttttccccacaattagttgccgaacatttgggggtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttaccggcataaccgaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaagattctgatgcaacggctctatgaccaggggcatcgcaatatcagttat
ctcggcgtgccgcatagtgacgtgacgaccgggaagcgacgtcacgaagcctacctggcg
ttctgcaaagcgcataaactgcatcccgttgccgctctgccagggcttgctatgaagcaa
ggctatgaaaacgtagcaaaagtgattacgcctgaaactaccgcgttactgtgcgcaacc
gacacgctggctcttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtaggtaatacgccgttaatgaaattccttcatccggagatcgtcaccgta
gatcctggctacgccgaagctggacgccaggcggcctgccaattgatcgcacaggtaacc
gggcgcagcgaaccgcaacaaatcatcatccccgccaccctgtcctga
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