Shigella flexneri NCTC1 (serotype 2a): NCTC1_04764
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Entry
NCTC1_04764 CDS
T03751
Symbol
yjjM
Name
(GenBank) GntR family transcriptional regulator,transcriptional regulator NanR,Transcriptional regulators,phosphonate utilization associated transcriptional regulator,Bacterial regulatory proteins, gntR family
KO
K23015
GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sft03000
]
NCTC1_04764 (yjjM)
Transcription factors [BR:
sft03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NCTC1_04764 (yjjM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
HTH_Crp_2
Rrf2
HTH_24
HVO_A0261_N
HTH_11
Phage_rep_O
HTH_IclR
HTH_3
HTH_5
HTH_36
HTH_28
HTH_DeoR
TrmB
HTH_29
CENP-B_N
Sigma70_r4
HTH_23
Mab-21_C
Motif
Other DBs
NCBI-ProteinID:
CDX09817
UniProt:
A0A379YZ13
LinkDB
All DBs
Position
1:complement(4480610..4481524)
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AA seq
304 aa
AA seq
DB search
MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTTVRHILSQLRECGVLTQ
VGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQRQLRPRETFSELQLARAAG
VSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQLFELREMLETHSLQHFLNLPD
HDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLLSAADNIFFDQSLEIISVIF
HFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINENT
RYAH
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttcacaaaatttacgccacaatgtgattaaccaggtcattgatgatatggcg
cggggtcatatcccttccccacttccatcgcaaagtgcgctggcggaaatgtacaacatc
agccgcactacagtgcgtcatattctcagccaattacgcgaatgcggcgtcttaacgcag
gttggaaacgactatgttattgcgcgtaaacctgaccatgatgacggtttcgcctgtact
accgcttcaatgagtgaacaaaacaaagtgtttgagcaggcttttttcacgatgataaac
cagcgtcagttacgccctagggaaactttttctgaactgcaactggctcgggccgcgggt
gtcagcccggtggttgtaagagaatatcttttaaaattcggccgttataatcttattcaa
agcgaaaagcgcggccagtggagcatgaagcaattcgatcaatcctacgccgagcagctg
tttgagctacgcgaaatgctcgaaacacattcacttcagcactttctcaacctgcctgat
catgatccccgctggctgcaggcgaaaaccatgctagaacgtcatcggctactgcgtgac
aacatcggcaatagctttcgcatgttctcgcaacttgacagagattttcactccttactg
ctttcagctgccgacaatatcttttttgatcaatcgcttgagatcatctcagtcatcttt
cattttcactatcaatgggacgaaagcgatcttaaacagcgcaatatcattgccgtcgat
gaacatatgaccattctcagcgctctgatttgccgcagtgaccttgatgccacccttgcg
ctccgtaaccatttgaattcagctaaacaatcaatgattcgatccattaatgagaacacg
cgttatgctcattaa
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