Shigella flexneri NCTC1 (serotype 2a): NCTC1_04782
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Entry
NCTC1_04782 CDS
T03751
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi,DNA polymerase III subunit psi,DNA polymerase III subunit psi,DNA polymerase III, psi subunit,DNA polymerase III, psi subunit,DNA polymerase III psi subunit
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft03030
DNA replication
sft03430
Mismatch repair
sft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC1_04782 (holD)
03430 Mismatch repair
NCTC1_04782 (holD)
03440 Homologous recombination
NCTC1_04782 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sft03032
]
NCTC1_04782 (holD)
03400 DNA repair and recombination proteins [BR:
sft03400
]
NCTC1_04782 (holD)
Enzymes [BR:
sft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC1_04782 (holD)
DNA replication proteins [BR:
sft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC1_04782 (holD)
DNA repair and recombination proteins [BR:
sft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC1_04782 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
CSTF_C
Motif
Other DBs
NCBI-ProteinID:
CDX09832
UniProt:
A0A200NYT1
LinkDB
All DBs
Position
1:4494048..4494461
Genome browser
AA seq
137 aa
AA seq
DB search
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIASPAHVRLVMVANDLPALTDPLVSDVLRA
LTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTELRANPTARAA
LWQQICTYEHDFFPRND
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccgacgagactggcagttacagcaactgggcattacccagtggtcgctgcgt
cgccctggcgcgttgcagggggagattgccattgcgagcccggcacacgtccgtctggtg
atggtggcaaacgatcttcccgccctgactgatcctttagtgagcgatgttctgcgcgca
ttaaccgtcagccccgatcaagtgctgcaactgacgccagaaaaaatcgcgatgctgccg
caaggcagtcgctgcaacagctggcggttgggtactgacgaaccgctatcattggaaggc
gctcaggtggcatcaccggcgctcaccgaattacgggcaaacccaacggcacgcgccgcg
ttatggcaacaaatttgcacatatgaacacgatttcttccctcgaaacgactga
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