Syntrophobacter fumaroxidans: Sfum_0108
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Entry
Sfum_0108 CDS
T00418
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu00061
Fatty acid biosynthesis
sfu00071
Fatty acid degradation
sfu01100
Metabolic pathways
sfu01212
Fatty acid metabolism
sfu02024
Quorum sensing
sfu04146
Peroxisome
Module
sfu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sfum_0108
00071 Fatty acid degradation
Sfum_0108
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sfum_0108
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sfum_0108
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sfu01004
]
Sfum_0108
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfu04147
]
Sfum_0108
Enzymes [BR:
sfu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sfum_0108
Lipid biosynthesis proteins [BR:
sfu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sfum_0108
Exosome [BR:
sfu04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sfum_0108
Exosomal proteins of breast cancer cells
Sfum_0108
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABK15811
UniProt:
A0LEF9
LinkDB
All DBs
Position
131216..132925
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AA seq
569 aa
AA seq
DB search
MDRIWLKSYDPRVPHHAEYPEECLPRLLEARVKKLPGNSATEFYGARLTYEALWKQISSL
ANALRLLGLRHGDRVAVMLPNCPQTVITYYAVLWLGGVVVLTNPLYVEREMEHQWKDSGA
KYLVVLDHLYPKARKVIPETAIEKVIVTGIAECLPFLLKHLYPLKAKLKKLFTAVPYDER
TIFNFTRLIRSTEPTPPPCEVRLDDLALLQYTGGTTGIAKGVMLSHRNILSNVIQLASWV
QDLRFGEERFLALLPIFHVFGMTVAMNLPLYAGSALVLVPRFDIDEIMKTIRKARPTLFP
GVPTIYAAINGHPKAETFDLSSIRICVTGSAPMPVESLRRFESLTGSVILEGYGLSETSP
VTHANPVEGVRKPGSIGLALPDTDCKIVDLELGTRDMAVGEVGELVIRGPQVMKAYWKMP
EETANALRDGWLYTGDIARMDEDGYVYIIDRKKDMIISGGYNIYPREVDEVLYEHPKVLD
AVAVGVPDDYRGEIVKAFIVPRVGETLTEDEIKQFCKTRLAAYKVPRLIELRDSLPKTAV
GKISRKELRKQALDEHESKKTREKADDGR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcatctggttgaagagctatgatccccgagtgcctcaccacgcagaatacccg
gaagaatgtctgccgcggctgctcgaagcgagagtgaagaagctccccgggaattcggca
acggagttctacggtgcccggttgacttacgaggccttgtggaagcagatttccagcctc
gccaacgccctccggctcctcggcttgcgacacggcgaccgggtcgccgtcatgctcccg
aactgcccccagaccgtgatcacgtattacgcggtcctctggctgggaggcgtggtcgta
ctgacgaatccgctctacgtcgaacgcgagatggaacatcagtggaaagactcgggtgcg
aagtacctcgtcgttctggatcacctctatcccaaggcccgaaaggtcatcccggagacg
gcgatcgaaaaggtcatcgtgaccggcatagcggaatgtctcccgttccttctgaagcat
ctctatccactcaaggcgaaactgaaaaaactcttcacggccgttccctacgatgagcgg
acgattttcaatttcacccggctgatccgctcgacggagccgacgcctccaccttgcgag
gtgaggctcgacgacctggcactgctccaatacaccggtggaaccacgggcatcgccaag
ggagtcatgctgtcccaccggaacatcctgagcaatgtcatccagcttgcctcctgggtg
caggacctgaggttcggggaggagcgttttctcgcccttctgccgatctttcacgttttc
ggcatgaccgtcgcaatgaatctgcccctgtatgcggggagcgcgctggtgctcgttccg
aggttcgatatcgacgaaatcatgaagaccatcaggaaggcgaggcccactctgttcccg
ggggttcccaccatatatgcggccataaacggtcatccgaaagcggagacgttcgatctg
tcctcgattcgcatctgcgttaccggatcggccccgatgccggtggagtctttgcgcagg
ttcgaaagtctcaccggcagtgtcattcttgaaggctacggcctctcggaaacgagcccg
gtcactcacgccaatcctgtcgagggggtgcgcaagccgggctcgatcgggttggcgctg
ccggataccgactgcaagatcgtcgacctggaattgggaacccgtgacatggctgtgggt
gaggtgggtgagctggtgatccgagggccgcaggtcatgaaggcctactggaagatgccg
gaagagacggccaacgcgctcagagacggttggctctacaccggagacatcgcgaggatg
gatgaagacgggtatgtctacatcatcgaccgcaagaaggatatgatcatatccgggggc
tacaacatttatccgcgggaggtcgatgaggtgctctacgagcatccgaaggttctcgac
gccgtggccgtgggcgttcccgacgattaccggggagaaatcgtcaaggcgttcattgtg
ccccgagtgggggagaccctgacggaagatgaaatcaagcagttttgcaagaccagattg
gcggcctataaggtcccccggctgattgaactgagggattccctgccgaagacggcggtt
gggaaaatctccaggaaggagctgcgcaagcaggcgcttgacgagcatgagtcgaaaaag
acgcgggaaaaggccgatgacgggcgctga
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