Syntrophobacter fumaroxidans: Sfum_0213
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Entry
Sfum_0213 CDS
T00418
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfu
Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfu03032
]
Sfum_0213
03400 DNA repair and recombination proteins [BR:
sfu03400
]
Sfum_0213
Enzymes [BR:
sfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Sfum_0213
DNA replication proteins [BR:
sfu03032
]
Prokaryotic type
DNA Topoisomerases
Sfum_0213
DNA repair and recombination proteins [BR:
sfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sfum_0213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
zf-Mss51
Motif
Other DBs
NCBI-ProteinID:
ABK15914
UniProt:
A0LER2
LinkDB
All DBs
Position
249092..251395
Genome browser
AA seq
767 aa
AA seq
DB search
MSKSLLIVESPTKAKTLGRYLGKDFIVKASVGHVKDLPKNRLGINLEKDFQPEYQVIRGK
KKVISELHEAAAKSGAIFLGPDPDREGEAIAWHIAEEIGATDKPVYRVLFYELTRKAIQE
ALAKPDRLNRELYEAQQARRILDRLVGYMISPILWQKVKRGLSAGRVQSVALRLICAREK
EIRDFDSREYWTITALLGTQASADAPAKSASRRFKAELFRCGKKKCTISTGEEARELVDR
LRPLDYRVSKVERRKKKRHPAPPFITSTLQQEAARKLHFSARQTMNVAQRLYEGLELGKE
GAVGLITYMRTDSTRLSADAVQAVRDYIAGHWDKAYLPAKPAAYKSKAGAQGAHEAIRPT
DVNRTPETVAGFLTKEQLKLYTLIWKRFTACQMAPAVLDQTSVDIAAGDYVLRASGSIVE
FPGFMTLYVEGRENGDEDSETEGLLPELKEGEVLRLEDLKADQHFTQPPPRYTEASLIKE
LEDLGIGRPSTYATILSTILDREYAVVRKKSLFPSELGWLIDGLMVENFPSVVDVDFTAK
MEKSLDEIEQGQHPYRNLLAEFYEQFSKTLESARTNMVNLKAVGRRTDLQCPQCGLPLHI
RWSRNGPFLACSGYPDCRFSSDYRRDEKGNIEPVAEESTGETCEKCGRPMILKKGRFGNF
LACSGYPACKNTKAPGTGIPCPREGCSGELVERVSRGGRHFFGCSRYPECKTAFSGRPVP
GKCPSCGTGPLIEKGGKGGSVKRVCVNPSCKYVETVPAAADRKAAKD
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcattattgattgtcgaatccccgacaaaagcgaagacacttgggagatac
cttggaaaagatttcattgtaaaagcctctgtggggcatgtgaaggatcttcccaagaac
aggctcggaatcaatctggaaaaggatttccagccggaataccaggtaatacgcggcaag
aagaaggtcatcagcgaactgcacgaggccgccgcaaagtcgggagcgatctttctcggt
ccggaccccgaccgcgagggtgaggccattgcgtggcatatcgcggaagaaatcggtgcc
acggacaagcccgtataccgggtgcttttctacgagctgacccggaaagcgatacaggaa
gctcttgccaagcccgacaggctgaaccgggagctctacgaagcccagcaggccaggcgc
attctggaccgcctggtaggatatatgatttccccgatcctgtggcagaaagtgaagcga
gggttgagcgccgggagggtgcagtcggtggcccttcggttgatctgcgcgcgggaaaag
gagatccgggatttcgattccagggagtactggaccataaccgctttgctggggacgcag
gcatcggccgatgcgcccgcgaagagcgcgtcccggcggttcaaggcggagctgttccgt
tgcgggaagaagaaatgcacgatttccacgggagaggaagcccgcgagctggtagaccgg
ctgcggccgctcgactatcgggtgagcaaggtcgaacgcaggaagaagaaacgccatccg
gcgcctcccttcatcaccagcacgctgcagcaggaggcggccaggaagctgcatttctct
gccaggcagaccatgaatgtggcccagcggctctacgaggggctcgaactgggaaaggaa
ggggccgtcggcctgatcacgtacatgcgtaccgactcgacacggctgtccgcggatgcc
gttcaggcggtccgggactacatcgccggacattgggacaaggcctatctgccggccaag
cccgccgcgtacaagagcaaagcgggcgcccagggagcgcacgaggcgatccggcccacg
gacgtgaatcggaccccggaaaccgttgcgggctttctgacaaaagagcagctcaagctc
tatacgctcatctggaaacgtttcacggcatgccagatggcgcctgccgttctcgaccag
acctcggtggatatcgcggccggggactacgtcttgcgtgcgtccggctcgatcgtcgag
tttccgggtttcatgacgctgtatgtcgagggtcgggagaacggggatgaggattcggag
accgaggggctgctgcccgagctgaaggaaggggaggtcctgaggctggaagacctgaag
gcagatcagcatttcacccagcctccgccgcggtataccgaagcctccctgatcaaggag
ctcgaagatctcggcatcgggcggcccagcacttatgccacgatcctttcgacgatcctg
gatcgggaatatgccgtggtccgtaagaagagcctcttccccagcgaattgggatggctg
atcgacggcctgatggtggaaaacttccccagcgtggtggacgtcgattttaccgccaaa
atggaaaaaagcctggacgaaatcgaacaggggcagcacccttatcgcaaccttttggcg
gaattttacgagcagttttcgaagacgctcgaatccgcgcggaccaacatggtgaacctc
aaggcggtcggacgccggaccgatctccagtgcccgcagtgcggcctgccgctgcacatc
cggtggagtcgcaacgggccgttcctggcctgcagcggctatccggactgccggttctcg
tcggactacaggcgggatgaaaagggaaacatcgagccggtggccgaggaatccaccggc
gagacgtgtgagaagtgcgggcgaccgatgatcctgaagaaggggcgtttcgggaacttc
ctggcttgcagcggctatccggcgtgcaagaacaccaaggcgcccggtacgggaatcccg
tgtccgcgcgaaggatgttcgggggagttggtggaacgggtcagcagaggcggccggcat
ttcttcggctgcagcagatatccggaatgcaagacggccttttcggggcggccggtcccg
gggaaatgcccttcatgcggcaccgggccgttgattgaaaaggggggcaagggagggagt
gtgaagcgggtctgcgtcaatccgtcctgcaagtatgtggaaaccgttcccgccgcggcg
gaccggaaggccgcaaaggattga
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integrated database retrieval system
