Syntrophobacter fumaroxidans: Sfum_0359
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Entry
Sfum_0359 CDS
T00418
Name
(GenBank) alpha amylase, catalytic region
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu00500
Starch and sucrose metabolism
sfu01100
Metabolic pathways
sfu01110
Biosynthesis of secondary metabolites
Module
sfu_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
sfu_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Sfum_0359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfu04147
]
Sfum_0359
Enzymes [BR:
sfu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Sfum_0359
Exosome [BR:
sfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Sfum_0359
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
DUF3459
DUF5696
CBM_48
GHL6
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
ABK16059
UniProt:
A0LF57
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All DBs
Position
425356..427839
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AA seq
827 aa
AA seq
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MSWIPVHFTYHVGLQGGIFRNVRLVGSWDANGSHSDQWTGVPMREEVSDSGCPCFRATVN
LNGDQAGWTFGWGVLLDGPGGANRWGITTEVHDRNSSERFRGFQLKGPEQFNEYHLTHCR
RLGANKLHRPGGGEPAVRFAVWAPNALHVEMVRGDAATGYIDDNGTGALAAFPMHKEMVD
GTWTGIWRTDDDSEGLESFAQFDHTPYMFRITKDDDTVCYRTDLYSRCQIGSGKKNPEGK
KYDGRPTGLAGSVSCSVVVDPERVTELFDEPFPQKQWLDADEFWKNEFDPLRPVPTRIDD
LVIYEMHVPGLGCGKTDAAGEPFTGDLKDAVQMLDYLVDLGVNAVEVLPMNEFEGWAAWG
YATSHYFAVEYAGGGRDQFKHFVRECHRRGLAVLLDVVYNHYAHNAERAEWMYDSNRHEK
NIYYWYEGMPSDYRDYEHAAGDPTLDPRKRPASGHGGYVDNMSTGYAPRFCEEMVRKMFI
SSAAALVHEFHVDGFRVDQTTSIHSYAVVHADGRAAADARIFGAKFLRELTRTLKLIKPT
VMLIAEDHSGWSAVTEPPDKGGLGFDAYWYADFYHHLIGDTDKGADYAKLIKTCGFGDDR
PLAVDYFVGALRHAGNLTVVYHESHDEAGNAKFSGRTIAVAVNRATLSGETRRWAEARCR
LACGLNMLSPGVPMFFMGEEVGFQKDYPYDLFLSQREDFLRERGGSGANLFRFYQDIIKL
RRRKPALRTAGLVPLHVRNDNRVLVFRRSLENEHLIVFASFNNYAFVDGYRVNEAEIPDG
AWREIFNSDAAVYGGNNVGNGGMVRESRYGSMDAVIPANGFVVFERL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggatacccgttcatttcacttatcatgtgggcctgcaaggcggcatattccgc
aatgtcaggctggtgggcagctgggatgcaaacggcagccattccgaccaatggaccggc
gttcccatgcgggaagaggtctcggacagcggctgcccctgcttcagggccaccgtgaac
ctcaacggcgaccaggccgggtggaccttcggctggggcgttctgctcgacggcccggga
ggcgccaatcgatggggcatcaccacggaagtgcacgaccgcaactcgtcggaacggttc
cgcggattccagctcaaagggcccgagcagttcaacgaataccatctcacccactgccgc
cggttgggcgccaacaagctccaccgtcccggcggcggtgagccggccgtacgctttgcc
gtctgggcgcccaacgcgctccacgtcgagatggtgcgcggggatgccgccacgggctac
attgacgacaacggcacgggggcactggccgcgttcccgatgcacaaggagatggtcgac
ggaacgtggaccgggatatggcgtaccgacgacgattcagagggtctggagagctttgcg
cagttcgatcacacgccctacatgttcaggatcaccaaggatgacgataccgtctgctac
cggacggacctctattccaggtgccagatcgggagcggcaaaaagaatcccgaggggaaa
aagtacgacggaagaccgaccgggctggccgggtcggtgagttgctcggtggtggtcgat
cccgaacgcgtcaccgagctcttcgatgagccctttcctcagaagcaatggctggacgcg
gacgagttctggaaaaacgagttcgatccgctgcgcccggtgccgacgcgcatcgacgac
ctggtcatctacgaaatgcatgtccccgggctgggatgcgggaaaacggatgccgccggt
gagccgttcaccggcgatctgaaggatgccgtgcagatgctggattacctggtcgatctt
ggcgtcaacgccgtggaagtcctgccgatgaatgaattcgagggatgggcggcctggggc
tatgcgacgtcccactatttcgccgtcgagtacgcggggggagggcgtgaccagttcaag
cacttcgtgcgtgaatgccatcggcgcggccttgcggtgctcctggacgtcgtttacaat
cattacgcgcacaacgccgaaagagcggaatggatgtacgattccaatcgtcacgagaag
aacatctactactggtacgagggcatgccgtccgattatcgcgactacgagcacgccgcc
ggcgatccgaccctcgatccccgcaaaaggcccgcttccggtcacggagggtacgtcgac
aacatgtccaccggctatgcgccccggttttgcgaggaaatggtgcgcaagatgttcatc
agcagcgccgcggccctggtgcatgaattccacgtggatgggttcagggtggatcagacc
acctccatccacagctacgccgtggtccatgccgacggccgcgccgccgccgatgcccgc
attttcggcgccaagttccttcgagagctcacgcgcaccctcaaactgatcaagccgacg
gtcatgctcatcgccgaggaccattccggatggtccgccgtgacggaacccccggacaag
ggcggtctgggtttcgatgcatactggtatgccgatttctatcatcacctcatcggcgat
accgacaagggcgccgactacgcaaaactcatcaagacctgcggctttggcgacgaccgc
cccctggccgtcgattatttcgtcggcgcgctgcggcatgcgggcaaccttaccgtcgta
taccacgaatcccacgacgaggccggaaacgcgaagttctcggggcgcaccatcgccgtg
gccgtcaaccgggcgactctttcgggggagacgaggcgctgggccgaagcgcgctgccgc
ctggcctgcggcctgaacatgctgtctccgggagttcccatgttcttcatgggagaggag
gtcgggtttcagaaggattatccgtacgatctctttctgagccaacgggaggattttctg
cgcgagcgcggtggcagcggtgcgaacctgttcaggttctaccaggacatcatcaagctg
cgtcgccgaaaacccgcgctgcgaacggccgggctcgttccgctgcacgtccgcaacgac
aaccgcgtgctggtgttcaggcgctccctggaaaacgagcacctcatcgttttcgccagt
ttcaacaattacgcattcgtcgacggctatcgcgtgaacgaagccgaaatccccgatggc
gcctggcgggagatcttcaacagcgacgcggccgtctacgggggcaacaacgtcggcaac
ggcgggatggtgcgtgagtcccgatacggttcaatggacgccgtcatccccgcaaacgga
ttcgtcgttttcgaaaggctgtag
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