Syntrophobacter fumaroxidans: Sfum_0413
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Entry
Sfum_0413 CDS
T00418
Name
(GenBank) uncharacterized domain
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sfu
Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfu03009
]
Sfum_0413
Ribosome biogenesis [BR:
sfu03009
]
Prokaryotic type
ribosomal protein modification factors
Sfum_0413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
TPR_1
TPR_2
TPR_8
TPR_12
TPR_11
TPR_14
ANAPC3
RMD1-3
TPR_6
TPR_16
TPR_19
TPR_7
TPR_9
CFAP70_TPR_C
TPR_5
TTC22_C
TPR_21
ARM_TT21_C
TPR_CcmH_CycH
NatA_aux_su
TTC22_N
ARM_TT21_N
Paf67
Motif
Other DBs
NCBI-ProteinID:
ABK16113
UniProt:
A0LFB1
LinkDB
All DBs
Position
complement(501542..503296)
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AA seq
584 aa
AA seq
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MSSRVFVADCFKAFRHDQDKARSPDDTVAWVRKRLSGLNVDILNKTIRIDTGRLDIPVYI
SLCGSDATRLTGTKKQMGKGASPIQAEASALMELMERYSFFSFIHQSDFPTLRYREVPQQ
VVSPEDFKRSIHDETTPVDLVRSFLQDFPLRWAVARNLTQKIYQMIPIDWFYLINEYNGP
AAGNTIEEAILQSLCEVVERHVGSVICYGERPTPTIDPGSVRDPAAVELIDKFRKQGIVL
HLKDFSLDTGIPSVGALAYDPSTFPDRSEIVFTVGTTSNPEKSLCRALTEIAQLAGDFEN
RTSYRPTLPKYASLDQARYLTDDHETIPISALPDLSHDNMRIEIERCVDALKRIGMEVMV
INVEHPELQVPAVYTVIPGAHFLEHTRDTDFAQHAARTILRGCAPGEVVAQMERLLNLFG
PRYDLTFFLAHGLELEDKPGPAIPLFRKALEQEPDPRELASIHVHIASCHKALGEYEPAL
EALERAELLNSELKEIYNLRGFCYFKLKKHHEAIEAFEKAIELDPGSAIDYANIGSNLRD
LGHREEAIKVYRIALELDPGIDFARENIDRLEADLARERAAGQS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacgagtattcgttgccgactgcttcaaggcttttcgccacgaccaggacaag
gccagaagtcccgacgacaccgtcgcctgggtcaggaagcggttgtccgggctcaacgtc
gatatcctgaacaagaccatccgcatcgacaccgggcgcctcgacattcccgtctacatc
agcctttgcggctcggatgcaacgcgcctgaccggcaccaagaaacagatgggcaaaggc
gcctctccaatccaggcggaagcgagcgccttgatggagctcatggagcgctacagcttc
ttctcgttcatccaccagagcgatttccccacgctccgctaccgggaagtgccgcagcag
gtggtgtcgcccgaggacttcaagcggtccatccacgatgagaccacgcccgtcgacctg
gtgaggagcttcctccaggattttcccctgcgctgggctgttgcccggaacctcacgcag
aagatttatcaaatgatccccatcgactggttctacctcatcaacgagtacaacggtccg
gcggccggaaacaccatcgaggaggccatcctgcaaagtctttgcgaagtggtggaaagg
catgtcgggtccgtcatctgctacggcgaacgccccaccccgacgatcgatcccggctcg
gttcgagacccggccgcggtggaactgatcgacaagttccgaaagcaggggatcgtcctg
catctcaaggacttctccctggataccgggatcccttccgtcggagcgctggcctacgac
ccgtcgacgttccccgaccggagcgagatcgtcttcaccgtcgggaccacctccaacccc
gaaaaatcgctctgccgagccctgaccgaaatcgcccagctcgcgggcgatttcgagaac
cggacctcctaccggcccactctgcccaagtacgcttccctcgaccaggcgcgctacctg
acggacgatcacgagacgatccccatcagcgcccttcccgacctttcgcacgacaacatg
cggatcgaaatcgagcgttgcgtggacgccctgaaacggatcggcatggaagtcatggtc
atcaacgtggagcacccggaactgcaggtgcccgccgtctacaccgtcattcccggcgcc
cacttcctggagcacacgcgcgacacggatttcgcccagcacgcggcgcgaacgatcctc
aggggctgcgcccccggggaggtcgtcgctcagatggaacggctgctcaaccttttcggc
ccccgctacgatctgacctttttcctcgcccacggcctggagctcgaagacaaacccggg
cccgccatcccgcttttccgcaaggcgctcgaacaggaaccggacccgagagagctggcg
agcatccacgtccacattgcctcctgccacaaggcgctgggagaatacgaaccggcgctc
gaagccctggagcgcgcggagctgctcaacagcgagctcaaggaaatctataatctgcgg
ggattctgctatttcaagctgaagaagcatcacgaagcgatcgaggcgttcgagaaggcg
atcgaactcgacccggggtcggccatcgactacgccaacatcgggtccaacctgagggac
ctcggccacagggaagaagccatcaaggtctaccggatcgccctcgagctggaccccggc
atcgatttcgcccgggagaacatcgaccggctggaagccgacctggcccgggagcgggcc
gcggggcagagctga
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