Syntrophobacter fumaroxidans: Sfum_0465
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Entry
Sfum_0465 CDS
T00418
Name
(GenBank) Nodulation efficiency protein NfeD
KO
K07403
membrane-bound serine protease (ClpP class)
Organism
sfu
Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99975 Protein processing
Sfum_0465
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NfeD
CLP_protease
SDH_sah
DUF6056
Motif
Other DBs
NCBI-ProteinID:
ABK16165
UniProt:
A0LFG3
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Position
complement(559234..560589)
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AA seq
451 aa
AA seq
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MSLSRHPRGGFEMLKSLYARIPFHAAWFLVVGALVLFPFNGCIAGSDHVNIVEIQDTINP
GVEDFIRYAVATSEEDGAQFLVILLDTPGGLLTSTRGIAQAILNAKVPIVVYVYPSGAQA
ASAGVFITAAADIAAMAPGTNIGAAHPVMGGGENVPSTMDEKVLNDTLAFSRSIAAQRGR
NAEWLEQSIRRSVSATAEEAFKENVIDLVADDLPALMKKLDGWNLSKGGKSVVLQTRAVE
QRTLTPSWQHRVLRGIANPNLAYILLMIGLAGLYFELSQPGAIFPGVIGGVSLILALYSL
QTLSVNYAGFLIILLAVIFFILEIKVASHGMLSIAGVLCLVLGSLMLFRAPGSTTALAMS
VFIPTVLTVSAFFVTVASLAFRAQISRPQIGVEAFEGLIGEAHTDLRPAGKVFVNGELWN
AEADEEILMGEQVQVVSMHNLKLKVRKISGR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgagcagacatccccggggaggttttgagatgctgaagtccctttatgccagg
atcccgtttcatgccgcatggtttcttgttgtcggcgccctcgtcctcttccccttcaac
ggttgcattgccggttccgatcacgtcaacatcgtcgaaattcaggacacgatcaacccg
ggcgtcgaggacttcatcaggtatgccgtcgccacatccgaggaggacggcgctcagttt
ctcgtgattctgctcgatacccccgggggacttctcacttcgacccggggcatcgcccag
gctatcctcaacgcgaaggtcccgatcgtggtctacgtgtatcccagcggagcacaagcg
gcgtcggcgggagtgttcatcaccgcggcggccgacatcgcggccatggcgcccggaacg
aacatcggcgcggcacatcccgtgatgggcggaggagagaatgtccccagcaccatggat
gaaaaggttctcaacgacacgctggcgttttccaggagtatcgccgcccagagggggcgc
aatgcggaatggctggaacagagcattcgccggagcgtttccgccaccgccgaagaggcc
ttcaaggagaacgtcatcgacctggtggccgacgacctgcccgcgttgatgaagaagctg
gacggatggaacctttccaagggggggaagtctgtcgtgctgcagacccgggcagtcgag
cagcgcaccctgacgcccagttggcagcaccgggtactccggggaatcgccaacccgaat
ctggcctatattctgctcatgatcggcctggccgggctctacttcgaactgtcccagccg
ggagcgattttccccggcgtcatcgggggcgtctcgcttatcctcgccctgtactcgctt
cagacgctttccgtaaattacgccggctttctgatcattctccttgcggtgattttcttc
attctggaaatcaaggtggcctcacacgggatgctcagcatcgcgggagtgctctgcctg
gttctcggttccctcatgcttttccgggctccgggcagcaccacggccctggccatgtcc
gtattcattccgacggtcctcacggtatcggcgtttttcgtgaccgtggccagtctcgcc
tttcgcgcccagatcagcaggccgcagatcggcgtggaggcgttcgaggggctcatcggg
gaagcgcacaccgatctgcgacccgcggggaaggtgtttgtgaacggcgaactgtggaat
gcagaagcagatgaagaaattcttatgggagaacaggtccaagtcgtctcgatgcataat
ttaaagttgaaagtaaggaaaatcagtggtagatag
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