Syntrophobacter fumaroxidans: Sfum_0643
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Entry
Sfum_0643 CDS
T00418
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
sfu
Syntrophobacter fumaroxidans
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA_2
AAA
BrxC_BrxD
HTH_30
Xre-like-HTH
HTH_1
HTH_28
FleQ
TIP49
AAA_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABK16342
UniProt:
A0LFZ0
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Position
773146..774582
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AA seq
478 aa
AA seq
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MAAILIVDDDPQLRQSFEKLLSQEGHSVKTAPSGEAGLAVARSAELDLLIMDVCLPGMSG
LETFQAIRRFEPRLPVIIMTAFGTTETAIEATKMGAFDYVLKPFNIPEILVLIDQAIEAG
RFMRSRVELDVIPEAASKEAIVGRSKAMQEVYKAIGRVASTDATVLIRGESGTGKELVAR
AIYQHSQRADKPFLVINCVAIPETLLESELFGYEKGAFTGAVNRRVGRIEQANGGTVLLD
EIGDMPFSIQAKILRLLQEKSIERLGGREPIPVDVRIIAATNRDLEASLAEGKFREDLYY
RLKVVTLWLPPLRERPEDLALLAEYFLMRYAREMEIDNPGMADTARGVLQGYSWPGNVRE
LANAVQKSLIFSRGCPIAAEDFSKAIGSGASLRGTEDEFSDETIRQWLLRVLLSEGEGNA
FDSIMDRLAGLLIGEALNLTGGNRTRAARLLGLSRPTLLSKIEKYRLKAGAPLSGETP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcgatcctgattgtggatgacgatcctcaactgcggcagagcttcgagaagctg
ctcagccaggaagggcattccgtcaagacggcgccttcgggggaggccgggctggccgtc
gcgcgctcggccgagctggacctgctcatcatggatgtgtgcctgcccggcatgagcggt
ctcgaaacgttccaggcgatacgccggttcgaaccgcggctgccggtcatcatcatgacg
gcgttcgggaccaccgagacggccatcgaggcgacgaaaatgggggccttcgactacgtg
ctcaagcccttcaacatccccgaaatcctggtgctgatcgatcaggccatcgaggcgggg
cggttcatgagatcgcgcgtcgagctggacgtcatccccgaggcggcctccaaggaagcc
atcgtcggacggagcaaggccatgcaggaggtttacaaggccatcggcagggtcgcatcc
accgacgccacggtgctgatcagaggggaatcgggaacgggcaaggaactggttgcgagg
gccatctaccagcacagccaaagggccgacaagccgtttctggtgatcaactgtgtggcc
ataccggaaaccctgctcgaaagcgagctgttcggctatgaaaagggcgcgtttacgggc
gcggtcaatcgccgggtcgggagaatcgagcaagccaacgggggcacggttctgctcgat
gaaatcggggacatgccgttctcgatccaggcgaagattctgaggctgctgcaggagaag
agcatcgagcgtctcggggggcgcgaaccgattcccgtggacgttcgaatcattgccgcg
accaatcgcgatctcgaagcctcgcttgccgaggggaaattccgggaagacctttattat
cggctgaaagtggtgaccttgtggctgccgcctctgcgggagcggcccgaggacctggcg
ctcctcgccgaatatttcctcatgcggtatgcccgggaaatggagatcgacaacccgggg
atggcggacacggcgaggggagtgctccaggggtattcctggcccgggaacgtcagggag
ttggccaatgcggtccagaagtccctgatcttcagccgcgggtgtccgatcgcggccgag
gacttcagcaaggcgatcggcagtggagcctcgctcagagggactgaagatgaattcagc
gacgaaaccatccggcagtggttgctgagagtattgctctccgagggcgagggaaacgct
ttcgattcgatcatggatcgcctggccgggcttctgatcggcgaggccctgaatctgacg
ggcggcaaccggactcgagccgccaggctgctcgggctgtcgcgccccacactgctgtcc
aagatcgaaaaataccgtttgaaggccggggctccattgagcggcgagacgccctga
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