Syntrophobacter fumaroxidans: Sfum_0659
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Entry
Sfum_0659 CDS
T00418
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sfum_0659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfu03400
]
Sfum_0659
Enzymes [BR:
sfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Sfum_0659
DNA repair and recombination proteins [BR:
sfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Sfum_0659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
ABK16358
UniProt:
A0LG06
LinkDB
All DBs
Position
complement(792815..793795)
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AA seq
326 aa
AA seq
DB search
MPLLGAHMSIAGGLHNAFQRLLQVRGEALQVFLKNQRQWHPPPLSAHAVRLFQEERDNFA
HVPVAAHDSYLINLAAPDPDIAEKSVGAFASELDACAQLGIEFLILHPGFHRGAGISTGI
ARFAKNLDRACALAKAHSVTVLIETTAGQGSGIGSKFEEIADMLMKSKAGRPLGVCFDTC
HAFAAGYDLRDERSYERTFDRFEKTIGLRLLRWFHLNDSKAGFGSRVDRHEHIGRGRIGL
QGFRLLVNDPRFESHPMVLETPKGKDLRNDRKNLATLRSLLRSVDDSESEPFEEDREADP
ENGGERRPTPRDPAGSLKRGKPSGHT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctcggcgctcacatgtccatcgccggaggactgcacaacgcttttcaacgc
ctgctgcaggtacggggagaggccctgcaggtgtttctgaagaatcagaggcagtggcac
cccccaccgttgagcgcccatgccgtccgcctgtttcaggaggaacgggacaatttcgct
catgtccccgtcgccgctcacgacagctatctcatcaacctggccgcccccgatccggac
atcgcggaaaaatcggtcggtgcattcgcgagcgagctcgacgcgtgtgcgcaactgggc
atcgaattcctgatcctccatccggggtttcaccgcggcgcgggaatatccacgggcatc
gcccgcttcgcgaaaaacctggaccgtgcctgtgcccttgcgaaagcgcactccgtgacc
gtgttgatcgaaaccaccgcgggccagggttccggaatcgggtcgaaatttgaggaaatt
gcggacatgttgatgaagtcgaaggccggccggcccctcggagtctgcttcgacacgtgc
cacgcgtttgccgcgggatacgaccttcgagacgaacgctcctacgaacgcacgtttgac
cgcttcgaaaagaccatcggactccgtttgctgcgctggtttcacctcaatgattccaag
gcgggcttcggttcccgcgtcgaccggcacgaacacatcggtcggggaaggatcgggctc
caggggttccgcctgctcgtcaacgatccccgtttcgagtcacatcccatggtgctcgaa
actcccaagggcaaggatcttcgcaacgacaggaagaacctggcgacgctccgatcgttg
ctgagatccgttgacgattctgaaagcgaacctttcgaagaagatcgagaggccgatcct
gaaaacgggggcgaacgacgccccacgcctcgggatccggcgggatcgctcaaacgaggg
aaaccttccggtcacacctga
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