Syntrophobacter fumaroxidans: Sfum_1010
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Entry
Sfum_1010 CDS
T00418
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sfum_1010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfu03000
]
Sfum_1010
Transcription factors [BR:
sfu03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sfum_1010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_16
AAA_22
GAF_3
HTH_23
AAA_7
nSTAND3
bpMoxR
AAA_3
BrxC_BrxD
HTH_28
Torsin
ATPase
HTH_50
TIP49
Motif
Other DBs
NCBI-ProteinID:
ABK16704
UniProt:
A0LH02
LinkDB
All DBs
Position
complement(1244292..1245824)
Genome browser
AA seq
510 aa
AA seq
DB search
MEKRIRETELNVIFETCRVIGQALKLDQALDTILAILSSSLAMKRATITLEDEDTGYLII
RASHGLTDAERRRGVYRKDEGITGLIFQSADSYVVPDISKEPLFLNKTRSRLIQKESISF
LGVPILLHGKAIGVLHVDRLFGDEVPFEEDIRLLSIVATLIAQFVSLNRQVKLREAKLLR
DCSPSGKKGIEAGDRFFMVGRSPSMLVVQRHIEKVAPSKASVLLLGESGTGKTLVAQMLH
ELSIRSSAPFVKINCASLPENLLESELFGYEKGAFTGAVRSKPGRIEEAEGGTVFLDEVG
ELTPALQAKLLRFLQDKEFERLGSTRTRVVDVRVLAATNRDLAAVVAEGTFREDLYYRLN
VFPIQIPPLRARKEDIPDLLHHFLDRISREYGRRIGITNAAMALLAGYDWPGNVREMENL
VERMVIMADEDEIGVNVLPPFLSEQMTGSGGETLSRIEKMERKEILAALERNGWNQTRTA
KELGITLRQIGYRVRKFGLDRLLMHQRRGG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcggataagagaaacggaactcaacgtgattttcgaaacgtgcagggtcatc
ggacaggcgctgaagctcgaccaggcccttgacacgattctggcgattctctcctcctcc
ctcgccatgaaacgcgccacaatcacgctcgaggacgaggataccggctacctcatcatc
cgggcttcccacggcttgaccgatgcggaacggagacggggggtctaccggaaggatgaa
gggatcaccgggctgattttccagtccgccgattcctacgtggtgccggacatcagcaag
gaacccctgtttctgaacaagacgcgctcgagactgattcaaaaggagtccatcagtttc
ctcggggttcccatattgttgcacggcaaggccatcggcgttctgcacgtggaccggttg
ttcggcgacgaggtccctttcgaagaggacatccggctcctgtccatcgtggcgaccctg
atcgcccagttcgtcagtctgaaccgccaggtaaaactgcgcgaggccaaactgctcagg
gattgctcgccgtccggaaagaaagggatcgaagctggggaccgcttcttcatggtgggc
aggagtccgtcgatgctcgtcgtacagcgtcatatcgagaaggtggcgccgagcaaggct
tcggtgcttctcctgggagagtctggaacgggaaaaacgctggtggctcaaatgctgcac
gagctgagcatcaggtccagcgcgccttttgtgaagatcaattgcgcgtctctgcccgag
aacctgctcgaatcggagctcttcggttatgagaagggcgcattcaccggcgcggtgaga
tcgaagcccgggagaatcgaggaagcggagggggggaccgtttttcttgatgaggtcggc
gagcttacgccggcgctccaggccaagttgcttcgttttctccaggataaggaattcgag
aggctcgggagtactcggaccagggtggtcgacgtgcgggtgctcgccgccacgaaccgg
gaccttgccgcggtggtggcggaaggaacgtttcgggaggacctctactacaggctgaat
gtcttccccattcagatcccccctctcagggcacgcaaggaagacattccggatctgttg
catcatttcctggacagaatatcccgggaatacggccgccgcatcggaataaccaacgcc
gcgatggcattgctcgcgggatatgactggccgggcaacgtgcgggagatggagaacctg
gtggaacgcatggtgatcatggccgatgaggacgagataggcgtgaacgtgttgcctccg
ttcttgagcgagcagatgacgggtagcgggggcgaaacgctttcccgaatagagaaaatg
gagcgcaaggaaatcctggcggcactggaacgcaacggatggaaccagacgcgcacggca
aaggagctcggcataacactcagacagattggctatcgggtcaggaaattcgggctggac
aggcttttgatgcaccagcggcgaggagggtag
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