Syntrophobacter fumaroxidans: Sfum_1040
Help
Entry
Sfum_1040 CDS
T00418
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sfum_1040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfu03400
]
Sfum_1040
Enzymes [BR:
sfu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sfum_1040
DNA repair and recombination proteins [BR:
sfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sfum_1040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABK16734
UniProt:
A0LH32
LinkDB
All DBs
Position
1284899..1285483
Genome browser
AA seq
194 aa
AA seq
DB search
MARRDKERSLHALYDAIRRDAFYRKENMGDVFVPGDGSMEDGVIVLIGEAPGRDEEREGK
PFVGAAGRNLNALLLENGLAREDLFITNLLKYRPRTSTGANRSPAAAECRYALPFLEREL
DILRPGLAVCLGLSPAKALLNDPHLKMGRANGALFRGAGLNILVTYHPSPFNFMVPEKSS
ALRRAFRQVAVRPE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgggacaaggaaagaagccttcacgcattgtacgatgcaatccgccgggat
gcgttctaccggaaagagaacatgggcgatgttttcgtcccgggcgacgggtcgatggag
gacggcgtcatcgtgttgatcggggaggcccccggacgcgatgaggaaagagaaggcaaa
cccttcgtgggagcggccggccggaacctgaacgcgcttttgcttgaaaacgggctcgcg
cgcgaagatctcttcatcaccaacctgttgaagtaccgcccccgcacttccacgggagcc
aaccgcagccccgcggccgcggaatgtcgatatgcccttccctttctggaaagagagctg
gacattctgcggccgggactcgcggtgtgcctgggactgtcaccggcaaaagctctcctg
aacgacccgcacctcaagatgggacgggccaatggcgccttgttccgcggagccgggctg
aatatccttgtcacgtatcatccctcgccgttcaatttcatggttccggaaaagagcagc
gcacttcgaagggccttccggcaagttgccgtccggcccgaatga
DBGET
integrated database retrieval system
