Syntrophobacter fumaroxidans: Sfum_1089
Help
Entry
Sfum_1089 CDS
T00418
Name
(GenBank) TIR protein
Organism
sfu
Syntrophobacter fumaroxidans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIR_2
CHAT
TIR
ThsB_TIR
NIF11-like_cyano
XFP_N
Motif
Other DBs
NCBI-ProteinID:
ABK16782
UniProt:
A0LH80
LinkDB
All DBs
Position
1345768..1347525
Genome browser
AA seq
585 aa
AA seq
DB search
MARSSIFISYSHKDREWLSRLSAHLGVLEQEGDVGAWSDENLRPGDDWPREIREAMDSAK
IAVLLVSANFTSSKFIMQKEVPVLIDRWRSGSLKILPLIVTPCPYGQSILREVEPRPKHR
DSVADGSPADQERDLRDLTVEIANLLVPEAPQPPGGRKPVTAPPGQRVVTRPAARHDAYA
LLDVRLSHREWDRYCVELGFTHSGDSAPPLPLTHFVSFDLPKLIGTRDNLEYARRLRNLL
FAEPSHRDFLRTAQDSAAELRVPLQLRMSISACARELHWLRWELLIQGGSGENDLSFEST
CLARYAAADARSWRDIQHRPKRPLRALLVAGLTDWFKPSVRSTDAGDPGIEKCARAESIL
EASGLATAHTLGYLNGDAFRSELRATAPDILYLCVDLPQTDESIELGTVGVEWWASRLVN
LPIAEAFRDIETPPRMVILCPVVRGRRPEAAESHSTWFSILREAYELAQSGVLGVLTLQA
VLDDSTWDAFFKAFLDNLAPNGRMDHALHAARAALKTSGRPWAPVLISCLRTPRIWYEPR
FTEGTPVDKTWDTLLLKIRNGECTPMIGPGLNSTIARLRTEIALA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcatccatcttcatcagttacagtcacaaggacagggaatggctctcccga
ctttcggctcacctcggcgtgctcgagcaggaaggcgacgtgggagcctggagcgacgag
aacctgaggccgggggacgactggccgcgcgaaatccgcgaggccatggacagcgcgaag
atcgcagtgcttctcgtgtccgcgaacttcacgagctcgaaattcatcatgcagaaggaa
gtgcctgtcctgatcgaccgatggcgtagcggcagcctgaagatcctcccgctgatcgtg
accccgtgcccttacgggcagagcatcctgcgcgaggtcgaaccccggcccaagcaccgg
gattccgtggcggacggaagcccggcggaccaggaaagggacctccgcgacctcaccgtc
gagatcgccaatcttcttgtgccggaggcgccgcagccccccggcggcaggaaacccgtc
acggctccgcccgggcagagggtcgtcacgcggccggcggcccggcatgacgcctacgcg
ctgctcgacgtcaggctgagccaccgggagtgggaccggtactgcgtggagctcggcttc
acccactccggcgattccgcccctcccctccccctgacccacttcgtctccttcgacctg
ccgaaactcatcggaacccgggacaatctggagtacgcgcgccggctccgcaatctcctg
ttcgccgaaccgtcgcacagggattttcttcgaacggcgcaagactccgccgcggagctc
cgggtgccgctgcagctgcggatgtcgatctccgcctgtgcccgcgagctgcactggctg
cggtgggagctcctgatccaggggggatcgggggaaaacgatctctccttcgaatccaca
tgcctcgcgcgctacgcggccgcggatgcccgcagctggcgcgacattcagcacaggccg
aaacggcccctgcgcgccttgctcgtcgcgggattgacggactggttcaagccttcggtc
cggtccaccgatgccggggacccgggaatcgaaaagtgcgcgcgggccgaaagcatcctg
gaagcgtccgggctggcgaccgcacacacactgggatacctgaacggcgacgccttccgg
agcgagctcagggcgaccgcgcccgacatcctttacctgtgcgtcgaccttccccaaacc
gatgaatccatcgagctgggaaccgtgggcgtggagtggtgggcgtcacggctcgtgaat
ctgccgattgcggaggcgttccgggacatcgaaacgccgccgcggatggtgatcctgtgc
cccgttgtccgcggtaggcgtcccgaggcggcggaatcgcattccacgtggttttccatc
ctgcgtgaagcttatgagctggcccaatccggagtcctcggcgttctcacgctccaggcg
gtcctcgatgattccacgtgggacgcgtttttcaaggcgttcctcgacaacctcgctcca
aacgggcgaatggaccacgctctccacgcggctcgcgcggcgctcaagacttccggtcga
ccgtgggctccggtgttgatctcctgcctgcgcactccgcgcatatggtacgaaccccgg
ttcaccgagggtactccggtggacaagacctgggacaccctcctgctcaagatcaggaac
ggcgaatgcacacccatgatcggcccggggctcaacagcaccatcgccaggctccgcacg
gagatcgcgctggcctag
DBGET
integrated database retrieval system
