Syntrophobacter fumaroxidans: Sfum_1227
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Entry
Sfum_1227 CDS
T00418
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
sfu
Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfu03021
]
Sfum_1227
03009 Ribosome biogenesis [BR:
sfu03009
]
Sfum_1227
Transcription machinery [BR:
sfu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sfum_1227
Ribosome biogenesis [BR:
sfu03009
]
Prokaryotic type
rRNA transcription factors
Sfum_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_1
HHH_5
KH_NusA_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
ABK16919
UniProt:
A0LHL7
LinkDB
All DBs
Position
1518907..1520256
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AA seq
449 aa
AA seq
DB search
MASELKRLIDQVSREKGIDRQTLIHTLEEAIKSAIKKKYGTRQDLDVTYNEEYGELEAFQ
FKEVVETVTDPDKQVSLAEAIKLDPESEIGDELGIRMDTETLGRIAAQSAKQVIIQKMKD
AEREVVYEEFKSRKGEIAHGVVQRVDKSGIVVNMGQAEAILPPKEQIPREVFRQGDRVRA
YVLDVKKISKGPQIVLSRTHPHFLIQLFHGEVPEIVEGIVSIISAAREPGSRAKIAVISK
ATDVDPVGACVGMKGTRVQNVVQELRGEKIDIVPWNMDPAKFVVNALAPAIISKVIIDQA
NRSMEVIVPDDQLSLAIGKKGQNVRLASRLTNWRIDVKNESRHERQKQTGYQSMLRINGL
TAQLADRLYEAGITSLQEFIDASGSELEELTQLAGPVIEEMKAEAGRLVLENETTAEAAS
EGNETQQDGEASESPESLVEVSEEQVQGE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaacttaagcggttgatcgaccaggtgagccgcgagaagggaatcgaccgc
cagacgttgatccatacgctcgaggaggccatcaaatcggctatcaagaagaagtatggg
acgagacaggacctggacgtcacctacaacgaagaatacggtgagctcgaggcctttcag
ttcaaggaagtggtcgagaccgtgaccgatccggacaaacaagtttccctggcggaagcg
atcaagcttgatcccgaaagcgaaattggggacgagcttggtatccggatggataccgag
acactgggccgtattgccgcgcaatccgccaagcaggtcatcattcagaagatgaaagac
gccgagcgcgaagtcgtctacgaggaattcaagagtcgcaagggagagatcgcacacgga
gtcgtccagcgcgtggacaagagcggcatcgtggtgaacatgggacaggcggaagccatt
ctcccgcccaaggagcagattccaagggaagtctttcgccagggagaccgggtcagggct
tacgtgctggacgtgaagaagatcagcaagggacctcagatcgtcctgagccggactcat
cctcactttctgattcaattgtttcacggcgaggtgcctgagattgtggaaggcatcgtg
agcatcatcagcgcggcccgggaaccgggctcgcgcgccaagatcgccgtgatttccaaa
gccacggacgtggatcccgtgggcgcttgcgtgggcatgaagggaacgcgcgtgcagaac
gtcgttcaggaactgcggggggaaaagatcgatatcgtgccctggaacatggacccggcg
aagttcgtggtgaacgcgctggccccggcgatcatttcgaaggtcatcatcgatcaggcc
aaccgcagcatggaagtcatcgtacccgacgatcaactgtcgttggccatcggcaagaaa
gggcaaaacgtccgcctggcatcgcgcctcaccaactggcggatagacgttaagaacgaa
agccggcacgaacgtcagaagcagaccggataccaatccatgctgcgcatcaatggtctg
acggcacaacttgccgaccggctctacgaagcggggatcacttcactccaggaattcatc
gatgcaagcggctcggagctggaggaactcacccaattggcaggacccgtcatcgaggag
atgaaggccgaggcgggacgattggtactggaaaatgaaacgacggcggaagccgcttcc
gagggaaacgaaacgcaacaggacggggaggcttccgagtccccggagtccttggtcgag
gtttccgaggaacaggttcagggggagtaa
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