Syntrophobacter fumaroxidans: Sfum_1384
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Entry
Sfum_1384 CDS
T00418
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG family
KO
K02405
RNA polymerase sigma factor FliA
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu02020
Two-component system
sfu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sfum_1384
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sfum_1384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfu03021
]
Sfum_1384
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sfu02035
]
Sfum_1384
Transcription machinery [BR:
sfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sfum_1384
Bacterial motility proteins [BR:
sfu02035
]
Flagellar system
Flagellar assembly proteins
Stator
Sfum_1384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
KNOX2
Motif
Other DBs
NCBI-ProteinID:
ABK17075
UniProt:
A0LI23
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All DBs
Position
1720484..1721323
Genome browser
AA seq
279 aa
AA seq
DB search
MHDSAGKRDAMEPMRSMTQNPCPIEDAGGETKELVILKHSDLVKHMALRLFSRLPDHVSI
DDLISAGVIGLIDAVDKYDSGQGIPFKFYAKIRIRGAMLDEIRAMDWVPRSLRQKGNVLE
RTFSALEQKLGRCPSDEQVAGELNIGIEDYHRLLDEIKGISFLPENINEALLENGESGSL
ASDSEELFQHAYRQEIQRHLADAIRTLTEKEQLVLSLYYYDELTMKEVGTALGYTESRIS
QIHTKAIIKLRSRLAKRLTADDLPPYIGSRETCSAGSPK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactcagcaggaaaaagagatgccatggaaccgatgagaagcatgacacaaaac
ccatgtcccattgaagacgccgggggcgagaccaaggaactggtcatattgaaacacagc
gacctggtcaaacacatggccctgaggctgttctcgaggctgccggaccacgtttccatc
gacgacctgatcagcgcgggcgtcatcggactgatcgacgccgtggacaagtacgattcg
ggccagggcatcccgttcaagttctatgcgaagatcaggattcgcggagcgatgctcgat
gagattcgcgccatggactgggtcccgaggtccttgcgtcagaagggcaacgttcttgaa
agaacgttttccgccctggagcagaagctgggccgctgtccttccgacgagcaggttgcg
ggcgagctcaacatcgggatcgaggactatcaccggctgctcgacgagatcaagggcatt
tcgtttcttcccgagaacatcaacgaggcgctcctggagaacggcgagtcgggttctctg
gcgtccgattccgaggagctctttcagcatgcctaccggcaggagatccagcgccatctc
gcagacgccatccggaccctgaccgagaaggagcaactcgtcttgtccctgtattactac
gacgaactgacgatgaaggaagtcggcacggcgctcggctacacggaatcacgcatttcg
cagatccacaccaaggccatcatcaagctgcgcagccggcttgccaagaggctcaccgcc
gacgatctgccgccctacatcgggtccagggagacgtgttcggccggttctcccaagtaa
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