Syntrophobacter fumaroxidans: Sfum_1417
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Entry
Sfum_1417 CDS
T00418
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu00900
Terpenoid backbone biosynthesis
sfu01100
Metabolic pathways
sfu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Sfum_1417
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sfu01006
]
Sfum_1417
Enzymes [BR:
sfu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Sfum_1417
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Sfum_1417
2.5.1.29 geranylgeranyl diphosphate synthase
Sfum_1417
Prenyltransferases [BR:
sfu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Sfum_1417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
SQS_PSY
Stealth_CR4
Motif
Other DBs
NCBI-ProteinID:
ABK17108
UniProt:
A0LI56
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All DBs
Position
1758659..1759549
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AA seq
296 aa
AA seq
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MGFDLKLYLAERKQLVEDALEDCFPVPSGLEKSVLEAARYSLFAGGKRLRPILCLAAAEV
AGGSREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAVLAGDALL
TEAFDFVSKMDGDIPPRKILAVVATLVRASGYRGMIGGQVIDLECENRTVDLATVEYMHI
HKTGALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDLLDVEGDAREMGKKPG
SDAAKNKKTYPALLGITRSREAAREHVDAALQALAAFDDRAEPLRAIARYLLVRKA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgggtttcgatctgaagctttatcttgcggaacgaaagcaactcgttgaggatgctctc
gaggactgttttcccgtcccttccgggctcgagaaaagcgtgctggaggcggcacgatac
agcctgttcgcgggggggaaaaggctgaggccgattctttgtcttgcggcggccgaggtg
gcgggaggaagccgggaggcggccatgcccgcagcttgcgcactcgagatgatccacacc
tactctctcattcatgacgatctgccggcgatggacaacgacgatttcaggaggggcaag
ccgacgaaccacaaggttttcggcgaagcgatcgccgttctggccggagatgcgctcctg
acggaagccttcgatttcgtgtccaaaatggacggggatattcctccccgaaagatcctc
gcggtggtcgccaccctggtgagggcctcgggttaccgggggatgatcggcggacaggtc
atcgatctcgaatgcgaaaaccgcaccgtcgatctcgccactgttgaatacatgcacatt
cacaagacaggagcgctgctctccgcctccctggaggtgggagcactcctgggcggcggt
tccgatgcacaggtctcgagcctgaaacgttacggccaccacctgggtcttgctttccaa
atcaccgacgacctcctcgacgtggagggggacgctcgggaaatggggaaaaagcccggt
tccgatgccgcgaagaataaaaagacctatcccgccctgttggggataacccgttcccgg
gaggccgcccgtgaacatgtcgatgcggctttgcaggcgcttgccgccttcgacgacaga
gcggaacccttgagggccatcgcgcgttatttgttggtgcgcaaagcctga
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