Syntrophobacter fumaroxidans: Sfum_1430
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Entry
Sfum_1430 CDS
T00418
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sfu
Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfu03032
]
Sfum_1430
03036 Chromosome and associated proteins [BR:
sfu03036
]
Sfum_1430
03400 DNA repair and recombination proteins [BR:
sfu03400
]
Sfum_1430
DNA replication proteins [BR:
sfu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sfum_1430
Chromosome and associated proteins [BR:
sfu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Sfum_1430
DNA repair and recombination proteins [BR:
sfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Sfum_1430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABK17121
UniProt:
A0LI69
LinkDB
All DBs
Position
complement(1770304..1770576)
Genome browser
AA seq
90 aa
AA seq
DB search
MTKADLVIKMADGTGITKAAAEKALNNLIAAVSAALAKGDKITLVGFGTFDVAKRAKREG
RNPRTGQAITIPASKVVRFKAGNKLRDAIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagccgatctggttatcaaaatggccgatggaacgggcatcaccaaagccgct
gcggaaaaggctctgaacaatcttatcgcggccgtcagtgcggcacttgccaagggtgac
aagatcaccctggtgggtttcggaacgttcgacgtggccaagcgggccaagcgcgaaggc
cgcaatccccgaaccggtcaggccatcaccattcctgcttcgaaggtggtgaggttcaag
gccggcaacaagctcagagacgcgatcaaataa
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