Syntrophobacter fumaroxidans: Sfum_1582
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Entry
Sfum_1582 CDS
T00418
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sfum_1582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfu03021
]
Sfum_1582
03400 DNA repair and recombination proteins [BR:
sfu03400
]
Sfum_1582
Enzymes [BR:
sfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sfum_1582
Transcription machinery [BR:
sfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sfum_1582
DNA repair and recombination proteins [BR:
sfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sfum_1582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ABK17269
UniProt:
A0LIL7
LinkDB
All DBs
Position
1931608..1932615
Genome browser
AA seq
335 aa
AA seq
DB search
MQRNWRELIKPKRLEVETKGLPNTYGKFECEPLERGFGITLGNALRRVLLSSLQGAAITS
VKVDGVLHEFSTIPGVLEDVTDVILNLKEVRFKMHSDGPRLVVIEKDGEGEVAAGDIQGG
PHVEVLNPEQHICTLEKDARLRMELTVKQGKGYLPADRNIEENQPIGTIPIDAIFSPIRK
VSYTVTQARVAQITDYDKLTMEIWSDGSVKPDDALAYSAKILKDQLTIFINFEEEMETTE
EEVRAEPVFNDHLFRSVDELELSVRSANCLKNADIRYIGELVQKTEAEMLKTKNFGRKSL
NEIKEILTEMGLSLGMKLENFPSRDDIENRRKEQE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggaactggcgcgaactcataaaaccaaagcgcttggaagttgaaacaaaaggc
ctgcccaacacatacggcaagttcgaatgcgaaccgctggaacgagggttcggcattacg
ctggggaacgctctccggagagtgctcctgtcttcgctacagggtgccgccatcaccagt
gtcaaggtggacggcgtactgcatgagttttccacgattccgggggtgcttgaagacgtc
accgatgtcatcctcaacctcaaggaagtgcggttcaagatgcattccgacggcccgcgg
ctggtggtcatcgaaaaggacggcgaaggtgaagtcgccgcgggagacatccaggggggg
cctcacgtcgaggtgctcaacccggaacaacatatctgtacgctggaaaaagacgccagg
ctgcgcatggagctcacggtcaagcaaggaaagggatacctgcctgccgaccgcaacatt
gaagagaatcaacccatcggcaccatccccatcgacgccattttctcccccatccgaaag
gtcagctatacggtgacccaggctcgagtcgctcagattaccgactacgacaagctcacc
atggagatatggtcggacgggagcgtcaaaccggacgatgcgcttgcctactctgccaaa
atcctgaaagaccagttgacgattttcatcaactttgaagaggaaatggaaacgaccgag
gaggaggttcgcgcggagcccgtgttcaacgatcaccttttccgcagcgtcgacgaactg
gagctttccgtgcggtccgccaactgtttgaagaatgcggatatccgctatatcggagag
ctggtccagaagaccgaagcggaaatgctcaagaccaagaatttcggtcgcaaatccttg
aacgaaatcaaggaaattctcacggaaatgggtctttcgctgggcatgaagctggagaat
ttccccagtcgagatgacattgagaacagaagaaaggaacaggaatag
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