Syntrophobacter fumaroxidans: Sfum_2066
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Entry
Sfum_2066 CDS
T00418
Name
(GenBank) Uncharacterised P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
sfu
Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfu03019
]
Sfum_2066
Messenger RNA biogenesis [BR:
sfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Sfum_2066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_28
AAA_22
AAA_21
AAA_29
Queuosine_synth
AAA_16
AAA_18
CoaE
Viral_helicase1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABK17749
UniProt:
A0LJZ7
LinkDB
All DBs
Position
complement(2528584..2529444)
Genome browser
AA seq
286 aa
AA seq
DB search
MHVVVVTGLSGSGKSTAIKAFEDLDYFCIDNLPVPMLPEFLALCEKDMPDIHKIALGIDI
RERKFLKDYAKIFQDLEESGYRFEIIFLEAATDTLQRRYSQTRRVHPAASSQSLLVDAIH
QEREQLRALRSRATRIIDTGTLSVHQLKAMITRTYSMIGDTELLSIQVLSFGFKYGLPFE
ADMVMDVRFLPNPYFVEALKNLDGRSEEVSSWVLRWTATREFVEEYGALLLKLIPLYIRE
GKRYLTVAAGCTGGKHRSVVIAERIAGTLRDHNYFVNVFHRDLHLE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtggtcgtggtcaccgggctttcgggttcggggaagagcacggcaatcaaagcc
ttcgaagatctggactacttctgcatcgacaacctccccgtgcccatgctgcccgagttt
cttgccctgtgcgaaaaggatatgcccgacatccacaagatcgctctgggaatagacatc
agggagcgaaagtttctgaaggactatgcaaagattttccaggatctcgaggagtcgggg
taccgtttcgagatcatatttctggaagcagccaccgatactctgcagcgccgatacagc
cagacccgccgggtacaccccgcggcgtcctcgcagtccctcctggtcgatgccatccat
caggagcgggaacaactgcgcgctctgcgaagccgcgcaacccgcatcatcgatacgggc
acgctgtcggtccatcagctcaaggccatgatcacccgtacctactcaatgatcggcgac
acggagctgctgagcatacaggtgctttctttcggattcaagtacggccttccgtttgag
gcggacatggtgatggatgtcaggtttctgcccaacccgtatttcgtggaagctctgaag
aatctcgacggccgctccgaagaggtcagctcatgggtgctccggtggacggccactcgc
gagttcgtggaagaatatggtgccctgctgctgaaactgattcccctttatatccgcgag
ggaaagagatatctgaccgttgcggcgggctgtaccggcggcaagcaccgttcggtggtg
atcgccgagcgaatcgccgggacgttgagggatcacaattattttgtgaatgtcttccat
agggaccttcatttggaataa
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integrated database retrieval system
