Syntrophobacter fumaroxidans: Sfum_2092
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Entry
Sfum_2092 CDS
T00418
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sfum_2092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sfu02022
]
Sfum_2092
02035 Bacterial motility proteins [BR:
sfu02035
]
Sfum_2092
Two-component system [BR:
sfu02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Sfum_2092
Bacterial motility proteins [BR:
sfu02035
]
Pilus system
Twitching motility proteins
Sfum_2092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
PDE8A_N
Mg_chelatase
AAA_2
AAA
AAA_16
AAA_19
P-loop_TraG
nSTAND3
AAA_22
AAA_7
DUF815
ATPase
bpMoxR
HTH_50
AAA_3
PIF1
TIP49
ATP-synt_ab
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABK17775
UniProt:
A0LK23
LinkDB
All DBs
Position
2557906..2559294
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AA seq
462 aa
AA seq
DB search
MQPSEAKILVVDDEASMREFLEIMLQKQGYQVTCAETGKEALDFIQNETYDLVITDIRMK
PINGLDVLKQCKVISPSTVVIIISAYASAETAVAAMQEGAYDYLPKPFNVDEIRTVIENA
LRSKVGEEQPQEPEDGPLHFGCLIGESSGMRKVYELIKRVAATSSNVLITGESGTGKELV
AKAIHRQSARAQEAFVVVNCGGVPETLIESELFGYKKGAFTGASVTRKGLVEAAQSGTLF
LDEIGELSPALQVKLLRLVQEKTIKMIGDNEDILVDVRIISATNRNLEKMVVDGLFREDL
YYRLNVLPIRIPPLRQRAKDIPILAQFFLTKFRKRFGKDIHKISSYAIDILKHYDFPGNV
RELEHIIERGVALEASSIILPDSLTLSTYKKTQSEASVITPGSIPPEGIELDDYLVEIEK
KLLLQALQQSAGVKLKAAELLGISFRSFRYRLIKYGLDTEEE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgtcagaagcaaaaatcctggtggtggacgacgaagcgagcatgcgcgagttt
ctggagatcatgctccagaaacaaggctaccaggtgacgtgcgctgaaaccggcaaagag
gcgctcgacttcatccaaaacgagacctacgacctcgtcatcaccgatatcaggatgaag
cccatcaacgggctcgacgttctcaagcagtgcaaagtcatttcgccttcgaccgtggtg
atcatcatttccgcctacgccagcgccgaaaccgccgttgcggccatgcaggaaggcgcc
tacgactatctcccgaagccgtttaacgtcgacgagatccgaaccgtgatcgagaacgcc
ctgcgcagcaaggtgggcgaggagcagccccaggaacccgaggacgggccgctccatttc
gggtgcctcatcggcgagagttcgggcatgcgcaaggtctacgagctgatcaagcgcgtt
gcggccacctccagcaacgtgctgatcacgggcgagagcggcaccggaaaggaactggtc
gccaaggccatacaccgccagagcgctcgcgctcaggaagccttcgtggttgtgaactgc
ggcggggtccccgaaacgctcatcgaaagcgagctgttcgggtacaagaagggggcgttc
accggcgccagcgtgacccgcaaggggctggtggaagcggctcagagcggaacgttgttt
ctcgacgaaatcggcgagctgtcccccgccctgcaggtgaagctgcttcgcctggtccag
gaaaaaaccatcaagatgatcggcgacaacgaagatatcctggtggatgtccgcatcatt
tccgccaccaaccgcaatcttgaaaagatggtggtcgacgggctcttccgggaggatctc
tattaccgcctcaacgtgcttccgatccggataccgccgctgcggcagagggcaaaagac
attccgatcctcgcgcagttcttcctgaccaagttccggaagcggttcggcaaggacatc
cacaagatctcttcatacgccatcgacattctcaagcactacgatttcccgggcaacgtg
agggagctcgagcacatcatcgagcgcggcgtggcgctcgaggcgtcgagcatcattctc
ccggacagtctgacgctttcgacttacaaaaagacgcagagcgaggcgtcggtcatcacg
cccgggtcgatcccgcccgaaggcatcgagctcgacgactacctcgtggaaatcgagaag
aagctgctgttgcaggctctccagcagagtgccggggtgaagctcaaggcggccgagctg
ctcggcatcagtttccgctcctttcgctaccggctgatcaagtacggcctggacacggaa
gaggaatag
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