Syntrophobacter fumaroxidans: Sfum_2158
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Entry
Sfum_2158 CDS
T00418
Name
(GenBank) NHL repeat containing protein
Organism
sfu
Syntrophobacter fumaroxidans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_NHL
NHL
K319L-like_PKD
Big_9
SBBP
SGL
Cadherin_5
PKD_4
Vgb_lyase
Beta_helix
Cadherin_4
Arylesterase
Mala_s_1-like
REJ
NosD
Motif
Other DBs
NCBI-ProteinID:
ABK17840
UniProt:
A0LK88
LinkDB
All DBs
Position
complement(2639444..2644696)
Genome browser
AA seq
1750 aa
AA seq
DB search
MIFLAILLFPGPSSAERVVDTVAGLQSDDGPALEANLDSPSGVAVDTSGNVYLSDTNNHR
IRKLDVAAGQIQTLAGGQSPGYSGDGGTAAKAGLNRPRGIAVDAAGNVYFADSNNHCIRK
IDTSGIITTVAGTGSAGSNGDGGPAASARLAYPFGIAVDPSGNIYVADLGNHKVRRIDAA
GNISTVAGTGLLSRLGDGGPATEAGLTSPTGVAVDGSGNLFISDSGRHVIRRVDVGGTID
RVAGDYEQRYHGDGGPALSAGLMNAYGVALGPNNDLYIADTYNQRIRKVTDGVINTVAGT
GYGGSLEDGIPATGARLKSPVALAVDSQNNIYIADTYSHRIRRVDAAGNIVTVAGKGVPG
NAGDGGQAVAAILKSPHGLALGPDNSLYIADRTDHRVRKVTAAGVISTLAGTGEEGLSAD
GAAAAFANLDGPCAVAVGPSGSVYFSDSGSNRVRKIGLDGNLSTVAGKGVAGYSGDDGPA
AEARLNNPSAIAVDGSESIYIADTNNHRIRKVDGGGTITTVAGNGTPGYSGDGASATAAS
LNFPNGVAVDADGNVFIADTSNHRVRMVDSGVITTVAGNGTPGYSGDGGAAVSASLKAPH
GVWVDATGALYIADAHNYRVRKVAGGNIVTVAGTGTPGYSGDGGLAAAADFRSVHGLVVD
GSGNLFVADMENSRVRKVYEGFPAIPTTRTVCSAGCGYTSIQAAINASTDRDTVLVGPGT
YAENLNFGSKGVAAVSLEGAEGTIIDGNGSGTVVRFDSAGSYQARLAGFTVRNGRAASGG
GIRISGASPTIEDCIVTQNEAVSAGGGLYLENGAAPILRNCVVTLNTAAYGGGIYSSGSS
PLIQSTTISLNTAGNGGGGVFVSAGSPTFMGGVIRENTATLGGGGGAAFANSARPVVQRF
HIDHNESASVGGGLHVYGGSDLLAANTVVSSNTSSSGGGGMHVDGATASVYSLTFAENTG
DPAAGVYSRNSTVRIQNSILWDTSAALGYEGTEPTVSTSDVRMSGGTYPGTGNANADPLF
KAGDAQCHLQAGSPCVNAGGIADSPAIDTDLDIDGQIRSRLGTGGIDMGADEVSSCTPVA
IAQDVTVEQDQSLAVTLEATDTYGNALAYTVTQSPSHGALSGAAPDLTYTPVTGYVGSDT
FRFRAGNDYATSAPAVVAITVKRHNNPPVATHGSLATDEDTPASAHLAGTDPDSDDLTYS
IVVEPVNGTVVIDDAATGAYTYTPKRNGSGSDAFTFRVCDPFSCAVVPGIMEVTVRPVND
RPRISTIEPQTISEDAHTGALPFTVGDVETPAEALAVTGRSSNTALVRNADIVFRGEGEN
RTVTVTPLPNRNGKVYITLTVNDGLLSAQRTFLLTVTPEDDPPTITPIESERTRENVPTP
PVAFQVDDIDNPVETLKVSGRSSNTALVPDRNIVFGGSGASRTVTLIPAPERNGTTTITL
TVSDGALHADTSFTLTVLPVNGRPIADAGPTQKVKEGAVVILEGSNSIDPEREIVSYEWT
QVGGPPVTLRSGPEGRRANFTAPGGDPDGMSLLFRLTVKDEGGQSASDTCIVNVTRANRP
PVANAGQDRTVHAGDVVTLEGSALTEKGMEIASYKWTQISGPRVSLSPSPSGDKVSFAAP
EPDSVGVSLMFRLTVKDHRGLRSRDECIVNITGRNHTPAAEAGGNRTVQSGAEVVLNGSG
SSDPDDGVAGYLWSQTEGPPVVLSDPTAARPVFTAPRVSQSTRLVFRLIVTDHYGLRSRD
SCVVTVNPFD
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
gtgatttttcttgcgatcctcttattccccggtccttcctccgccgagcgagtggtcgac
accgtcgcgggactccaatccgacgacggtccggccctcgaggccaacctggattcgcct
tccggtgttgccgtcgacacctcggggaacgtctacctgtcggacaccaacaatcatcgg
atcagaaagctggatgtggccgccggtcagattcaaaccctggcgggcgggcagtccccg
ggttattccggcgacggggggaccgcggcgaaggccgggttgaaccggcccaggggcatt
gccgtcgacgccgcaggcaacgtctatttcgcggattccaacaatcactgcattcgaaaa
atcgacacctccggcatcatcacgaccgtggccggaaccggatccgccggttcgaacggg
gacggggggcctgccgcttccgctcgactggcctacccgttcggcatcgccgtcgatcct
tcgggaaatatttatgtcgccgacctgggcaatcacaaggtccgaagaatagatgccgcc
gggaatatttcgaccgttgccggaacgggcttattgagcagattgggagacgggggaccg
gcaactgaggcaggcctcacaagcccgacgggagtagccgtcgacggttccggaaacctg
ttcatcagcgacagcgggcgccatgtcatcaggagagtggatgtcggcggcacaatcgac
agggtcgcgggtgattatgaacaacgctatcacggtgacggcggtccagcgctcagcgcc
ggcttgatgaatgcctacggagtggccctcggtccaaacaacgacctctacatcgcggac
acctacaatcagagaatcaggaaagtcaccgacggcgtcataaacacggtggcgggaacc
ggctacggcggatcgctcgaggacgggattccggccaccggcgcaaggctcaagtctcct
gttgcgctggcggtggactctcagaacaatatttatatcgcggacacttacagccatcgc
atccggagagtggacgccgcgggcaacatcgtcaccgttgcgggcaaaggagttcccggc
aatgcgggagacggcgggcaggccgttgccgcgatcctcaaatcccctcacgggcttgct
ttgggcccggacaattcgctctacattgcggatcgaacggaccatcgcgtccgaaaggtt
actgcggccggggtcatcagcacgctggcggggaccggggaggaaggcttatcggctgac
ggcgctgccgctgcgttcgccaacctggacggtccttgcgccgttgccgtcggtccttcg
ggaagcgtgtacttttcggattcggggtccaaccgggtcaggaaaatcgggctggacggc
aatctctccaccgtggcggggaagggagttgcggggtactccggcgatgacggccccgct
gccgaagcccgtctcaacaacccgagcgccattgccgtggatggttccgagagcatctac
atcgccgacaccaacaatcatcgaatcaggaaggtggacggcggcggcaccatcaccacg
gtggccggcaacggcacgccgggctattcgggggacggggcctccgccacggccgcgtcc
ctcaactttcccaacggggtcgcggtggacgccgacggcaacgtcttcatcgcggacacg
tccaatcaccgtgtccggatggtggattccggggtcatcaccacggtggccggcaacggc
acgccgggctactcgggagacggcggtgccgccgtgtccgcctctctgaaggctccccac
ggcgtgtgggtcgacgccacgggagcattgtacattgcggatgcccacaactatcgcgtg
cgaaaagtggcgggtggaaacatcgttaccgtagcgggaacgggaaccccgggctattcg
ggcgacggagggcttgccgcggccgcggatttccggtccgtgcacggactggtggtcgac
ggctcggggaatttgttcgttgcggacatggagaactcacgcgtcaggaaggtgtatgaa
ggcttcccggcgatcccgacgacccgcacggtgtgctccgcggggtgcggctacacctcc
attcaggcggcgatcaatgcctccacggaccgggacacggtgctggtgggaccgggcaca
tacgccgaaaacctgaacttcggctcgaaaggtgtggcggcggtttccctggagggggcc
gaaggcaccataatcgatggaaacggttcgggcaccgtggtgaggtttgattcggccggt
tcctaccaggcccggctcgcggggttcactgtcaggaacggccgggcggcttccggaggg
ggcatccggatcagcggcgcttccccaaccatcgaggactgcatcgtcacgcaaaacgag
gcggtttcagcgggcgggggactgtacctggaaaacggggccgcgccgattctgcggaat
tgcgtcgtgaccctcaacacggcggcctacggtggaggcatttactcctccggcagttcc
cccctcattcaatccacaaccatctcgctcaacactgccggcaacggtggcggcggggtt
tttgtctctgccggaagtccgactttcatgggaggcgtgatccgggaaaacaccgccacc
ctgggcgggggcgggggtgcggcattcgcgaattccgccaggcccgtcgtgcagcggttc
cacattgaccataatgaaagcgcctccgtcgggggcgggctccatgtctacggcggctcc
gacctgttggcggcgaacaccgtcgtatcgtccaacacgagttcgtccggcggcggaggc
atgcatgtcgacggagccactgcttccgtctacagcctgaccttcgccgaaaacaccggg
gaccccgcggcgggagtctattcaagaaactccacggttcgcattcagaactccatcctt
tgggacacgagtgccgcattgggttacgagggcaccgaacccacggtgagcacctcggac
gtccggatgtccggcggcacgtatcccggtaccgggaacgccaatgccgatcctctgttc
aaggccggggatgcgcaatgtcatcttcaggccgggtcgccgtgtgtcaatgcgggcggg
atagccgattcacccgcgatcgacaccgatctcgacatagacggccagatccggtcccga
ctcggtacaggcggcatcgacatgggggcggacgaagtctcttcctgcactcccgtcgcg
atcgcccaggacgttacggtggaacaggatcaaagcctggccgtcacattggaggcaacc
gacacgtacggcaacgccctggcatacactgtcacgcaatctccatcccacggcgcgctg
agcggcgccgctcccgatctgacgtacactcccgtcacgggctatgtgggttcggacact
ttcagattcagggcgggcaatgattatgccacatccgcccccgccgtcgtcgcgatcacg
gtcaagaggcacaacaatccgccggtcgcgacccacggttccctggcgaccgacgaagac
actccggcaagcgcgcacctcgccggcaccgatcccgacagtgacgatctgacgtattcg
attgtcgtcgaaccggtgaatggcacggtggtgatcgacgacgccgcaacaggcgcctat
acgtacactccgaaacgcaacggctcgggctcggacgcattcaccttcagggtgtgcgat
cctttttcctgcgccgtggttcccgggatcatggaggtgaccgtcaggccggtgaacgat
cggccgaggatttcaacgattgagccccagaccatctcggaagacgcgcataccggcgcg
ctcccgttcacggtcggcgatgtcgaaacccccgccgaagccctggcggttacgggcagg
tcgtcgaacaccgccctggtccgcaacgccgacatcgttttccggggtgagggagagaat
cgcacggtgaccgtgactccactgcccaacaggaacggaaaggtttatatcaccctgacg
gtcaacgacgggttgttgtccgcgcagaggacattcctcctcacggtcactcctgaagac
gatccgccgacaatcaccccgatcgagtcggagcggaccagggagaacgtcccgacgccg
cccgtagctttccaggtcgatgatatcgacaatccggtcgagacgcttaaagtctcgggc
aggtcctcaaatacggccctggttcccgacaggaacatcgtcttcggcggttccggcgca
tcccgcacggtgaccctgattccggctcccgagcggaacgggaccacgacgatcacgctc
acggtgagcgatggagcgctgcacgccgacacttccttcacgctcacggtgcttccggtg
aacggccggccgatcgccgacgccggaccgactcagaaggtgaaagagggtgccgtggtg
attctcgaagggtccaattccatcgacccggaacgagagatcgtttcttatgagtggact
caggttgggggaccgccggtgacactgcggtcggggcccgagggcaggagggcgaatttc
accgcacccgggggcgacccggatgggatgtccctgctcttcaggctgacggtgaaagac
gaggggggacagtccgcatcggatacctgcatcgtcaatgtgacccgggcgaacaggccg
cccgtcgcaaacgcgggtcaggaccggaccgtgcatgccggggacgtggtgacgcttgaa
ggttcggccttgacggaaaagggaatggaaatcgcctcatacaagtggacgcaaatcagt
gggccgcgggtgtcgctgtctccctccccatccggcgacaaggtgtctttcgcggcgccc
gagcccgactcggtcggcgtgtccctcatgttccgactgacggtgaaagatcaccgcggg
ctgcgttcccgcgacgagtgcattgtcaacatcaccggcaggaaccacacgcctgcggca
gaggccgggggcaaccggacggttcaatcgggcgccgaggtcgtgctgaacgggtccggg
tcctcggacccggatgacggcgtggcgggctacctctggagtcaaacggaggggcccccc
gtggtgctttcagacccgacggcggcccggcctgttttcacggcaccgagggtgtctcaa
tcgactcggctggtcttccggttgatcgtgaccgaccactacggtttgcgttccagggac
tcgtgtgttgtgaccgtgaaccctttcgattga
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