Syntrophobacter fumaroxidans: Sfum_2258
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Entry
Sfum_2258 CDS
T00418
Name
(GenBank) AAA ATPase, central domain protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Sfum_2258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfu03019
]
Sfum_2258
03009 Ribosome biogenesis [BR:
sfu03009
]
Sfum_2258
04131 Membrane trafficking [BR:
sfu04131
]
Sfum_2258
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfu04147
]
Sfum_2258
Messenger RNA biogenesis [BR:
sfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Sfum_2258
Ribosome biogenesis [BR:
sfu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Sfum_2258
Membrane trafficking [BR:
sfu04131
]
SNARE
SNARE associated proteins
Others
Sfum_2258
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Sfum_2258
Exosome [BR:
sfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sfum_2258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
DUF4032
nSTAND3
AAA_5
AAA_19
nSTAND1
AAA_28
ABC_tran
NACHT
AAA_11
IstB_IS21
AAA_14
AAA_lid_3
AAA_33
RuvB_N
AAA_24
Mg_chelatase
TsaE
Rad17
Parvo_NS1
RNA_helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABK17940
UniProt:
A0LKI8
LinkDB
All DBs
Position
2779801..2780883
Genome browser
AA seq
360 aa
AA seq
DB search
MNENIPESLSPEECASKIFELSDARFEPAIAQDLWGKILQHKWLLSEKVGRDVGFRTACI
DFLENMEQAVVEYTNYKRKDLLKEMGAQTIGRELWDVISDSQPPKQLVQRRIILPLTEED
LSRKHGVSPPKTIIFFGPPGTGKTHFVKAIAGVLSWWYIEIAPSMLMEDGTEKVGANLRR
MMEKARQLEDAVIFIDEFEELAGHRDRADRLDKSITNEFLKQVPLFKNEANKVLLVCATN
FIQHLDPALLRPGRFDCIIPVGGLNEEERRTILEYYVSRLNRGEIDLDLIVKETSRFTPA
DIQYLFEQGAQFAFEQEIARKEDYKVTTETILHMMSRMHPSLTDEIISEFERDSITYARV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaatattccagaaagtctttcacctgaagaatgcgcgagcaaaatcttcgag
ttgagtgacgcaaggtttgagcccgcaatcgcacaggatttgtggggcaagatcctgcag
cataagtggctcttgtcagaaaaagtgggtcgagatgtgggctttcgaactgcatgcata
gattttcttgaaaacatggaacaagcggttgtcgaatacacgaactataaacgaaaagac
cttctcaaggaaatgggagcccagaccatcggtagagagttatgggatgtaatttccgat
tcacaaccccccaaacagttggttcagcggaggatcatcctcccgcttacggaagaggat
ctgtccagaaaacacggcgtgagtcctcccaagaccatcattttctttgggcctccgggc
accggaaagactcatttcgtcaaggcgatagctggagtcctttcatggtggtacattgaa
attgcacccagcatgcttatggaggacggcacggagaaggtcggcgccaacctgcggaga
atgatggagaaggcacgacagcttgaagatgctgtcattttcatcgatgagtttgaagaa
ttggcagggcatcgagatcgcgcagatcgcctcgataagtccatcactaacgaatttctc
aaacaggttccgctgttcaagaacgaagcgaacaaggtgctgctggtatgcgccaccaac
tttattcaacatctcgatccggcgctgcttcgtccgggcagattcgactgtatcattcct
gttgggggattgaatgaagaggagagaagaactattttagaatactacgtatcacggcta
aatagaggagagatcgacctggatctgattgtgaaagagacgtccaggtttacaccggct
gatattcagtacctttttgaacagggtgctcaattcgcatttgaacaggaaattgccagg
aaagaagattacaaagtaaccacagagaccattttgcacatgatgtcaagaatgcatcca
tctctgacggatgaaatcattagcgaattcgagagagatagtattacctacgcacgagtt
tag
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