Syntrophobacter fumaroxidans: Sfum_2345
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Entry
Sfum_2345 CDS
T00418
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sfum_2345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfu03019
]
Sfum_2345
03110 Chaperones and folding catalysts [BR:
sfu03110
]
Sfum_2345
03029 Mitochondrial biogenesis [BR:
sfu03029
]
Sfum_2345
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfu04147
]
Sfum_2345
Enzymes [BR:
sfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Sfum_2345
Messenger RNA biogenesis [BR:
sfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Sfum_2345
Chaperones and folding catalysts [BR:
sfu03110
]
Heat shock proteins
HSP60 / Chaperonin
Sfum_2345
Mitochondrial biogenesis [BR:
sfu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Sfum_2345
Exosome [BR:
sfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sfum_2345
Exosomal proteins of other body fluids (saliva and urine)
Sfum_2345
Exosomal proteins of breast cancer cells
Sfum_2345
Exosomal proteins of colorectal cancer cells
Sfum_2345
Exosomal proteins of bladder cancer cells
Sfum_2345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
ABK18026
UniProt:
A0LKS4
LinkDB
All DBs
Position
complement(2879688..2881316)
Genome browser
AA seq
542 aa
AA seq
DB search
MAVKEIKYYAEAREKIMAGVDTLADAVKVTLGPRGRNVVLEKSWGPPTVTKDGVTVAKEI
DLEDKFENMGAQMVKEVASKTSDVAGDGTTTATILAQAIYRAGSKLVSAGHNPMALKRGI
ELAVAAAVRELRNMSKPTKDQKEIAQVGTISANNDVAIGDIIAEAMNKVGKEGVITVEEA
KSMETTLEVVEGMQFDRGYVSPYFVTDPERMEVVLEDPYILINEKKISNMKDLLPVLEQI
AKMGAPLLIVAEDVEGEALATLVVNKLRGTLKVSAVKAPGFGDRRKAMLEDLAVLTGGKV
VSEDIGVKLENVSLQDLGRAKTVRIDKDNTTIVDGAGARSAIEARVKQIRAQIDETTSDY
DREKLQERLAKIVGGVAVVRVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVALL
RCLPALEKLDLHGEDAFGVKIVMRALEEPVRQIANNAGHEGSVVVQQVKQGTGSHGFNAD
TEVYEDLSAAGVIDPTKVVRFALQNAASVASLLLTTEAMIAEKPKKQKPAPAMPGAGMED
MY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcaaggaaatcaagtactacgccgaggccagggaaaagatcatggccggagtc
gacactctggccgatgcggtgaaagtcaccctgggacctcgaggtcgaaacgtcgttctg
gagaaatcgtgggggccccccaccgtgacaaaggacggagtgacggtcgccaaggaaatc
gacctcgaagacaaattcgagaacatgggcgcgcagatggtcaaggaggtcgccagcaag
acttccgatgtggcgggtgacggcacgaccaccgccaccattctggcccaggccatatac
agggcgggttcgaagctggtcagcgcgggtcacaatcccatggcgctcaagagaggcatc
gaattggcggttgcggcggcggtccgggagctcaggaacatgagcaagcccacgaaggac
cagaaagaaatcgcccaggtggggaccatcagcgcgaacaatgatgtcgccatcggcgac
atcatcgccgaagccatgaacaaggtcggcaaggaaggcgtgatcaccgtggaagaagcc
aagagcatggagaccaccctggaagtggtggaaggcatgcagttcgaccgcggttacgtg
tctccgtacttcgtcacggaccccgaacgcatggaggtcgtgctcgaggatccgtatata
ctgatcaatgaaaagaagatcagcaacatgaaagaccttttgcccgtgctcgaacagatc
gcgaagatgggcgccccgctgctcatcgttgccgaagacgtcgagggcgaagcgttggcc
accctggtcgtgaacaagctgcggggcacgctcaaggtcagcgccgtgaaggctccggga
ttcggggaccgacgcaaggccatgctcgaagaccttgcggttctcaccggcggcaaggtc
gtctccgaggacatcggcgtgaagctcgaaaacgtgtcgttgcaggatctcggtcgagcc
aagaccgtccggatcgacaaggacaatacgacgatcgtggacggcgcgggtgcccggagc
gccatcgaggcccgcgtgaagcagattcgggcacagatcgatgaaaccacctccgattac
gaccgagagaaattgcaggaacggctggccaagatcgtcggcggggtcgccgtggtgcgc
gtgggtgcggccaccgagaccgaaatgaaggagaagaaggcgcgcgtggaggatgccctg
aacgctacgcgggccgccgtggaggaaggcatcgtgccgggtggcggcgtggctctgctg
cgctgcctgccggcgctggaaaagttggacctgcacggagaggatgcgttcggcgtcaag
atcgtcatgcgcgctctcgaagaaccggttcgacagattgcgaacaacgcgggccatgaa
gggtccgtggtggtccagcaggtgaagcagggcaccgggtcgcatggtttcaacgcggat
acagaggtctacgaagaccttagcgccgcgggggtcatcgatccgaccaaggtggtgcgc
ttcgctttgcagaacgcggccagcgtggcttccttgctgctcaccacggaagccatgatc
gccgaaaagccgaagaagcagaaacctgctccggccatgccgggcgccggaatggaagac
atgtattag
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integrated database retrieval system
