Syntrophobacter fumaroxidans: Sfum_2404
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Entry
Sfum_2404 CDS
T00418
Name
(GenBank) pyridoxal-phosphate dependent TrpB-like enzyme
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu00260
Glycine, serine and threonine metabolism
sfu00400
Phenylalanine, tyrosine and tryptophan biosynthesis
sfu01100
Metabolic pathways
sfu01110
Biosynthesis of secondary metabolites
sfu01230
Biosynthesis of amino acids
Module
sfu_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sfum_2404
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Sfum_2404
Enzymes [BR:
sfu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Sfum_2404
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
ABK18085
UniProt:
A0LKY3
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All DBs
Position
2969421..2970782
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AA seq
453 aa
AA seq
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MEQVKVILADNEIPRQWYNILPDMPTPMHPPLHPGTGKPVEPQDLAAVFPMNLIEQEVST
QSWIDIPEAVLEKYLLWRPTPLCRARNFEKLLDAPVKIYYKNEGVSAPGSHKPNTAIPQA
YYNKVFGIRRISTETGAGQWGSALSMACRMFGLQCRVFMVRISYDQKPYRRMMMSTWGAE
CIPSPSDFTRAGRRILSDDPESPGSLGIAISEAIEDAVGDENARYSLGSVLNHVLLHQTI
IGLEAHRQFEKIGEYPDVVMGCAGGGSNFAGLSLPFVRDKIHGREVSIIAAEPASCPTLT
RGPFAYDFGDTAMTTPLLPMYTLGHGFIPASIHAGGLRYHGMAPIVSHLVKEGIVQAQAY
DQIETFTAGLKWAQSEGFIPAPETNHVIAAVVREAELARQEGKEKVILFNWSGHGIIDLP
AYDAFLSGKLTQHALTDEEIREALKSIEGYPKP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggtgaaggtgattctggccgacaacgaaatccccaggcaatggtacaacata
ctccccgatatgccgactccgatgcatccgccgctgcatccgggaacgggaaaaccggtg
gaaccgcaggacctggccgctgtctttcccatgaacctgatcgagcaggaggtttccacc
caaagttggatcgatattcccgaagcggtcctggaaaagtatctcctgtggcgacccact
ccgctctgtcgtgcccgcaatttcgagaagctgctcgacgctccggtgaagatctactac
aagaacgaaggggtgagcgcgcccggctcccacaaacccaacacggccattccgcaagct
tactacaacaaggtgttcggcatccggcggatttccaccgagaccggggccgggcagtgg
ggcagtgccctcagcatggcgtgccggatgttcggcctgcaatgcagggtcttcatggtc
aggatcagctacgaccagaaaccgtaccggcgcatgatgatgtccacgtggggggccgag
tgcattccaagccccagcgacttcacgcgtgcggggaggagaatcctgtccgacgatccc
gagtcgccggggagcctgggcatcgccatcagcgaagccatcgaggacgccgtcggggac
gaaaacgcccggtactccctgggaagcgttttgaatcacgtgctgctgcaccagaccatc
atcggcctggaagcccaccgacagttcgaaaagatcggcgaataccccgacgtggtgatg
ggctgtgcgggaggaggaagcaacttcgccggactgtccctgcccttcgttcgggacaag
attcatggcagggaggtttccatcatcgccgcggagcccgcgtcctgcccgaccctgacg
cgcggaccgttcgcctacgatttcggcgacaccgccatgacgacgccgctcctgcccatg
tataccctggggcacggcttcataccggcctccatccacgccggcgggctccggtaccac
ggcatggccccgatcgtcagccacctggtcaaggaaggaatcgtccaggcccaggcctac
gaccagatcgaaaccttcaccgccggcctgaaatgggcccagtccgaggggttcattccc
gctcccgaaaccaaccacgtcatcgcggcggtggtccgtgaagcggagctcgcccggcag
gaaggcaaggagaaggtcatcctcttcaactggagcggccacgggatcatcgatcttccg
gcctatgacgctttcctctccgggaagctcacccagcacgcgttgaccgacgaggagatc
cgggaagccctgaaatccatcgaaggatatccaaaaccgtag
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