Syntrophobacter fumaroxidans: Sfum_2689
Help
Entry
Sfum_2689 CDS
T00418
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sfu
Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfu03032
]
Sfum_2689
03400 DNA repair and recombination proteins [BR:
sfu03400
]
Sfum_2689
Enzymes [BR:
sfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Sfum_2689
DNA replication proteins [BR:
sfu03032
]
Prokaryotic type
DNA Topoisomerases
Sfum_2689
DNA repair and recombination proteins [BR:
sfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sfum_2689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
PIN
Motif
Other DBs
NCBI-ProteinID:
ABK18367
UniProt:
A0LLR5
LinkDB
All DBs
Position
3326976..3329402
Genome browser
AA seq
808 aa
AA seq
DB search
MSEISAIERNSHDEYTAQQITVLEGLSAVRKRPSMYIGNVSTEGLHHLVYEVVDNSIDEA
LVGHCDSIKIQIHLDGSVTVDDNGRGIPVDTHEKENLPAVQVVMTMLHAGGKFDDASYKV
SGGLHGVGVSVVNALSEYLEVEIRREGKVYYQRYERGEAKTPLIVKGETQRRGTRVTFKP
DTEIFTDTEISFDILAQRLRELAFLNRGVSIELSDERIPKDRQYCYEGGLVSFVEYLNKN
KEPLYPEVIYVGGEKQGVSIDIAIQYNQTYNEKIFTFANNINTKEGGTHLVGFKTGLTRS
IKQYATQNKMAKADLDKMIGDDVREGLTAIVSVKLSQPQFEGQTKTKLGNSDVKGLVENL
VYEKLSIFFEENPKVIRTILDKVLEAARAREAARKAKELTRRKGVLSDHSLPGKLADCQE
RDPSRSEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKSRFDKMVENQEIRTMIS
ALGTGIGKDEYNPEKLRYHKTIIMTDADVDGAHIRTLLLTFFFRMMPELIERGHLFIAQP
PLYRLAVGKQEFYMKDDESLDAYLLSRAADKKQVFLAGSAKPLPPEQLIQLMRAYSRYKD
WLERQSQKGVPRDVIEHVIRIYSIRKLSPAEHEENIGVLRTELEKAGFEIVSIEDEEEHQ
GYDLEIRRPGVANGGTGVRLGYAFLQSIEFKKLLELYNNHLEIFNQTPYAVKDGQGEARF
DHPGDLFRFLTEEARKGTNIQRYKGLGEMNPEQLWETTMNPEKRTLLQVRVEDQYLADEL
FTTLMGDRVEPRRDFIQFNALDFRELDI
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaataagtgcaatcgagagaaactcccatgacgagtatactgcacagcagata
acggtgctggaagggctcagcgcggttcgcaaacgcccgtccatgtatattgggaatgtt
tcaaccgagggcctgcaccacttggtctacgaggtggtcgacaacagcattgacgaagcg
ttggtgggtcactgcgattccatcaagattcagatccacctcgatggttccgtcacggtg
gatgataacggccggggaattccggtcgatactcacgaaaaggaaaacctgcccgccgtc
caggtggtcatgaccatgctccacgcggggggtaaattcgacgatgcgtcttacaaggtt
tcgggggggcttcacggtgtcggcgtgtccgtggtgaatgcactcagtgaatacctggaa
gtcgaaatcaggcgcgagggcaaggtgtattaccagcggtacgagcgaggggaagccaag
actccgctgatcgtgaagggagagacgcagcgccgcggaacaagggtcactttcaaaccg
gacacggagatcttcacggatacggaaatcagctttgacatcctggcccagagactgagg
gaactggcgtttctgaaccggggcgtctccattgagctctccgacgagcggattcccaaa
gaccgtcagtactgctacgaaggaggactggtgtccttcgtggagtatctcaacaagaac
aaggaacctctttatccggaggtgatttatgtcggcggcgaaaaacagggcgtgagcatt
gatatcgccattcaatacaaccagacgtacaacgaaaaaatttttaccttcgccaacaac
atcaacacgaaagaaggtggaacgcaccttgtcgggttcaagaccgggctgacgcgttcc
atcaagcaatacgccacgcagaacaagatggcgaaggcggacttggacaagatgatcggc
gacgacgtgcgggagggactcaccgccattgtcagcgtcaagctttcgcagcctcagttc
gagggccagacgaagaccaagctgggcaacagcgacgtgaaaggcctggtggaaaacctc
gtttacgagaaattgtcgattttcttcgaagagaatccgaaggtgattcggacgatcctc
gacaaggtgctggaagcggcgagagcccgcgaggcggcgcgcaaggcgaaggaactcaca
cggcgtaaaggtgtgctgagcgaccactccctgccgggaaagcttgccgactgccaggaa
cgggatccgtcacggagcgagatattcattgtggagggggattcggccggcggctccgcc
aaacaggggcgtgaccgacgttttcaggcgatcctgccgctccggggcaaaatcctcaac
gtggaaaaatcccgattcgacaagatggtggaaaaccaggagatccgcacgatgatctcc
gcgctcgggaccggaatcggcaaggatgagtacaacccggagaaactgcggtatcacaag
accatcatcatgaccgatgcggatgtggacggcgctcatatccggaccttgctcctcacc
ttcttcttccgcatgatgccggaactcattgagcgcggacacctgttcatcgctcagccg
ccgctctatcggttggcggtgggcaagcaggaattctacatgaaggacgacgagagcctg
gatgcctacctgctgtcgagggcggcggacaaaaagcaggtgtttctggccgggagcgca
aaaccgcttcctccggagcaactcattcagcttatgcgtgcctactcccgatacaaagac
tggctggaaaggcagagccagaaaggggtgccgcgtgacgtgatcgaacacgtgatccgg
atttacagtatacgaaagctgtctccagcggagcacgaggagaacatcggcgtgctgagg
acggagctggaaaaggccgggttcgagatcgtttccatcgaggacgaagaggaacaccag
ggatacgacctggagatccgcaggccgggagtggccaacggaggaaccggggtccgactg
gggtacgcgtttctgcaatccatcgagttcaagaagctcctggaactctataacaatcac
ctcgaaatcttcaatcaaaccccgtacgcggtcaaagacggacagggggaggcccggttc
gatcatcccggggacttgttcaggttcttgacggaagaagcgaggaaaggcacgaatatc
cagcgttacaagggtctgggcgagatgaatcccgagcagctctgggagacgaccatgaac
ccggagaagaggactctgctccaggtgagagtagaggaccagtacctggccgacgagctg
ttcactaccttgatgggggaccgcgtagagccgcgccgggactttatccagttcaatgcg
ctggacttcagggaactggatatttga
DBGET
integrated database retrieval system
