Syntrophobacter fumaroxidans: Sfum_2789
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Entry
Sfum_2789 CDS
T00418
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu03030
DNA replication
sfu03430
Mismatch repair
sfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sfum_2789
03430 Mismatch repair
Sfum_2789
03440 Homologous recombination
Sfum_2789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfu03032
]
Sfum_2789
03400 DNA repair and recombination proteins [BR:
sfu03400
]
Sfum_2789
Enzymes [BR:
sfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sfum_2789
DNA replication proteins [BR:
sfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sfum_2789
DNA repair and recombination proteins [BR:
sfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sfum_2789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_5
AAA_22
AAA_16
TIP49
AAA_30
AAA_2
AAA_19
AAA_14
AAA_7
ResIII
RCF1-5-like_lid
nSTAND3
AAA_18
Mg_chelatase
TsaE
AAA_28
Sigma54_activat
SKI
PIF1
DUF815
CbiA
Glyco_tranf_2_5
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABK18467
UniProt:
A0LM15
LinkDB
All DBs
Position
3438514..3440322
Genome browser
AA seq
602 aa
AA seq
DB search
MSYLVIARKWRPQTFEEVVGQPHVTRTLQNAIRSSRIAHSYLFTGARGVGKTSIARILAK
ALNCETGVTPTPCNVCSNCTEIRQGNAVDVLEIDGASNRGIDSVRELRETVRYRPAKSRY
KVYIIDEVHMLTTEAFNALLKTLEEPPEHVVFIFATTEPHKIPATILSRCQRFDFRRIPS
HMLVDHLRHIAAQEDVALSEGVLYAIAREADGSMRDAQSLLEQMLSFSRDGLSDEEVLDV
LGVIDRRSIHRTGTAVLEGDVRTCLDVVEDIYRRGMDIRRFCRQLCDYFRNLLVVAFGEG
DSRRLDLPSDEKQLLAEAAGKTTPESLYLYFQTVLKSEEEIRRSTIPRIALEMLLLRLAR
LPRLESLQGVLDKISALEQGLKGATTGGGGSSAAVRDTRPPAREAARAAPPPMREPPPPG
TGASHSSAGTGRDAPDPIVPEPATGGETIPDLPRIEGEAVPLEDLSGRWPAFLKWLELKE
PILAAKLARSRIGSAAADSVELEVVEVFEEQLREPQTVARIGDAAEAFFRRRCAWTIRKK
PEGTGRGDTQREKKKKALSKRLVMEHPVVLQALEILGGELVDIRRPKTERGEPRSSRSKA
GE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacctcgtgattgcacgaaaatggcgaccgcagacttttgaggaagtggtcggc
cagcctcatgtcacccggactttgcagaacgcgatccgctccagccgcatcgcccattca
tacctgttcaccggggctcgcggcgtcggcaagacctccatcgcccgcattctggccaag
gcgctcaattgcgaaacgggggtcacgcccacgccgtgcaacgtctgttccaactgcacc
gaaatccgccagggaaacgcggtcgacgtgctcgagatcgacggcgcgtccaaccgcggc
atcgacagcgtccgggagcttcgggaaaccgtgcgctaccggcccgcgaagagtcgctac
aaggtgtacatcatcgacgaagtgcacatgctcaccacggaggccttcaatgcgcttctg
aagacgctcgaggagcctcccgagcacgtggtcttcatcttcgccaccaccgaaccgcac
aagattcccgcgaccatcctgagccgctgtcagcggttcgacttccgtcgcattccctct
cacatgctggtggatcacctgaggcacatcgccgcgcaggaggacgtcgcgctgtccgaa
ggcgtattgtacgccatcgcccgggaggcagacggcagcatgcgggacgcccagagcctg
ctcgaacagatgctgtccttcagcagggacggcttgagcgacgaggaggtcctggacgtc
ctgggggtcatcgaccggcggagcatccacaggaccgggacggcggtgctcgagggggac
gtgcggacctgtctcgacgtggtggaggacatctaccggcgcggcatggacatcaggagg
ttctgccggcagctgtgcgattactttcgcaatctgctcgtggttgccttcggggagggc
gactcgcggcggctggacctgccctcggatgagaagcaactgctggccgaggcggccggc
aagacgacgcccgaatctttgtatctctatttccagaccgtgctgaaaagcgaagaggag
atccgccgatccaccatcccccggatagcgctcgagatgctgttgctgcgcctggccagg
ctgccgcgcctcgagtcactgcagggggtgctcgacaagatttccgcgctggaacagggc
ttgaagggtgcaaccaccggagggggcgggagctcggcggcggtccgcgacacgcggcct
cccgcgcgggaggcggcccgggccgcgccgcctccgatgagagagccccccccgcccggg
accggggcttcgcactcgagcgccggcaccgggcgtgatgcacccgatccgatcgtgccc
gaaccggcgaccggaggcgaaaccatccccgacctgccgcggatcgaaggggaggccgtg
ccgttggaggacttgagcggccggtggccggcatttctcaagtggcttgagctcaaggaa
ccgatcctggcggcgaaactggcgcgcagccggatcggatcggccgccgcggactcggtg
gagctggaagtcgtcgaggtcttcgaggaacagctccgggagcctcaaaccgtcgccagg
atcggggacgccgccgaggcgttctttcgaagacgttgtgcgtggacgatccggaaaaag
ccggaagggaccggccgcggggacactcaaagggaaaagaagaaaaaggccttgtccaaa
cggctggtcatggaacacccggtggtcctgcaggcgctggaaatcctcgggggagaactg
gtggacatccggcgtccgaaaacggagcgtggcgagccgcgctcaagccggtcgaaggcc
ggggaatga
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