Syntrophobacter fumaroxidans: Sfum_2821
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Entry
Sfum_2821 CDS
T00418
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sfu
Syntrophobacter fumaroxidans
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfu03400
]
Sfum_2821
DNA repair and recombination proteins [BR:
sfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sfum_2821
Archaeal homologous recombinant proteins
Sfum_2821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABK18499
UniProt:
A0LM47
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All DBs
Position
3474241..3475392
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AA seq
383 aa
AA seq
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MRILHTADWHLGRIFHGVHLTADQAFVLDRLVRLASESKPDVVLVSGDVYDRAVPPPDAV
ALLDDTLSRLVLGLRIPVILIAGNHDSPERLSFGSKVLAAQCLHLAGTPAPDATPVVIDD
RHGPVSFCSLPYAEPALVRERLDRKDVVDHDSAMAAQIESARRRLPAGSRAVLVAHAFVA
GGIESESERSLSVGGAAAVGVEHFEGFHYAALGHLHRPQRAGADHVQYAGSLLCYSFAEA
GQTKSVNLVELDAAGRCAVERIPLAPSHEVRCIRGAFRELLAGPRAAESREDYIMAVLTD
KEPILDAHGRLSEIYPNLLHIERSHLAAAGETGGAARDHRRLSDLELFRAFFSQVTGDEL
TPEQAEAYAEIVENLRRAEREAD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatattgcacaccgcggactggcacctgggcaggatattccacggagtgcacctg
acggcggaccaggccttcgttctggaccggttggtgcggcttgcgtcggaaagcaaaccc
gatgtggtgcttgtgtccggcgatgtgtacgaccgcgcggtgcctcctcccgacgccgtg
gccctgctcgacgacaccctttcccggcttgtccttggccttcggattcccgtcatcctg
atcgcgggcaatcacgacagtcccgaacggctgagcttcggttccaaggtcctggccgcc
cagtgcctccacctggccggaacgcccgcccccgatgcgacgcccgtcgtcatcgacgac
cgtcacgggccggtctccttttgttccctgccttacgccgagccggccctggtgcgggaa
cggctggaccgcaaggacgtcgtggaccacgattcggccatggccgctcagatcgaatcg
gcaaggcgccgccttcccgccggaagccgcgccgttctggtcgctcacgcctttgtcgcc
ggaggaatcgaaagcgaatcggaacgctccctgtcggtgggcggcgcggccgccgtcggg
gtggagcatttcgagggatttcactacgcggcgctgggacatcttcaccgtccgcaacgg
gccggggccgatcacgtccagtacgcgggctcgctcctgtgctattcctttgcggaggcc
gggcagaccaagtcggtcaacctcgtggaactggatgccgcgggccgatgcgccgtcgag
cgcatcccgctcgcgccaagtcacgaggtccggtgcatccggggcgcgttccgggagctt
ctggcggggccccgggccgcggaatcccgggaagattacatcatggccgtcctgacggac
aaggaaccgatcctggacgcccacgggaggctttccgagatctaccccaacctgctgcac
atcgagcggtcgcaccttgcagccgccggcgaaaccgggggcgccgcccgggaccaccgc
cgactgagcgacctcgagctcttccgggcgttcttttcgcaggtgacgggcgacgagctc
accccggagcaggcggaggcctatgcggaaatcgtggagaatctgcgccgagccgaacgg
gaggccgactga
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