Syntrophobacter fumaroxidans: Sfum_3056
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Entry
Sfum_3056 CDS
T00418
Name
(GenBank) Radical SAM domain protein
KO
K22226
Fe-coproporphyrin III synthase
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu00860
Porphyrin metabolism
sfu01100
Metabolic pathways
sfu01110
Biosynthesis of secondary metabolites
sfu01240
Biosynthesis of cofactors
Module
sfu_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Sfum_3056
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GFIT
Motif
Pfam:
Radical_SAM
SPASM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ABK18730
UniProt:
A0LMS8
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Position
3763765..3764946
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AA seq
393 aa
AA seq
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MIGISKLYCGTVEPSDALRYGRHSGQLPSHLLQFSIDKKPVVVWNVTRRCNLRCVHCYAH
ARDQVFPDEMTGAEGKKVLDDLAQFGTPVVLFSGGEPLMRPDLVELAAYAVEKGMRAVIS
TNGTLITPAVARELKTVGLSYVGISLDGMEPVNDRFRGVKGAFRMALDGITACREAGIKV
GLRFTMNRLNAREIPAVFDLLEARDIPRVCFYHLVYAGRGTKLMEEDLSHEETRAAVDLI
IDRTRDLHERGKPKEVLTVDNHADGPYLYLRMLREGSTRASEVLELLQMNEGNNSGRGIG
CISWDGSVHADQFWRHYSFGNVRQRPFSEIWTDVSNPLMNQLKDKKLHVKGRCAECRWLG
VCGGNFRVRSEAATGDLWAPDPACYLTEREIAG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtatttcaaagctttactgtggaaccgttgagccctccgatgcccttcgctac
gggcgacacagcgggcaactgccttcccacctgctgcaattttccatcgacaagaaaccg
gtcgtcgtctggaacgtaacacggcgctgcaatctgcgatgcgtgcactgttacgcccat
gcccgggaccaggtttttcccgatgagatgaccggcgccgaggggaaaaaggtcctggat
gacctggcgcaattcggaacgcccgtggtgctcttttcgggcggggagccgctgatgcgc
cccgacctggtcgagttggccgcctatgcggtcgaaaagggaatgcgggcggtgatctcg
accaacgggacgctcatcactcccgcggtcgcccgcgagctcaagaccgtgggcctgtcc
tatgtcggcatcagccttgacggcatggagccggtcaacgaccgtttccgcggtgtgaag
ggggcttttcggatggcgctggacgggataaccgcttgccgggaagcgggaatcaaggtg
gggttgcgctttaccatgaaccgcctgaacgcgcgcgaaattccggctgtgttcgatctg
ctggaagcacgggacatcccgcgggtctgtttctaccacctcgtttacgccggacgcggc
accaagctcatggaggaggacctctcccatgaggagacccgcgccgcggtggacctcatc
atcgaccggaccagggacctgcacgagcgcggcaagcccaaggaggttctgaccgtcgac
aaccatgcggacggcccctacctctacctgagaatgctgcgtgaaggatcgacgagagct
tccgaggtgctggagttgctgcagatgaacgaaggcaacaactcgggccggggaatcggg
tgcatcagttgggacggcagcgtgcacgccgaccagttctggcgccactattccttcggc
aatgtgcggcagaggcctttcagcgaaatctggacggacgtctccaacccccttatgaat
cagctcaaggacaagaagctccatgtgaagggccgatgtgccgaatgccgttggctcggg
gtctgcggggggaatttccgggtgcgctcggaagctgccaccggcgatctgtgggcgccg
gaccccgcctgctatctgacggaacgggagattgccgggtag
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