Syntrophobacter fumaroxidans: Sfum_3112
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Entry
Sfum_3112 CDS
T00418
Name
(GenBank) PAS/PAC sensor hybrid histidine kinase
Organism
sfu
Syntrophobacter fumaroxidans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
PAS
PAS_9
PAS_8
HisKA
PAS_4
HPTransfase
Serine_rich
PIRT
Motif
Other DBs
NCBI-ProteinID:
ABK18785
UniProt:
A0LMY3
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All DBs
Position
complement(3823979..3826180)
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AA seq
733 aa
AA seq
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MNAIFIMAFVLASCLTGAYFLHKPIRILNRDKVLYLFGVAALLLGLRLFQVLWERGPGQP
RFSDPIFGWNEPVFLSAAIMVLVVCALLVPIVIRRGEERKSAGKGAEETERLLAAVLSAS
PVGFCLLKEDIIQWVNQALCDILGRGAEELEGRSIAGLYAEEGEHERVKTQLLNGCTSSE
GAGAAACWIRGNGSTLHCLLQAAPTGMSTLDGKRVLAVMDTSELKRKEEALLESEERYRR
FFEEDLAAAYVSTPDGRLLSCNPAFVRIFGFPSVEAAITSDLNFLQPASDSEAGVVELIR
KRKKIENYRCELNRCDGKRVHVVMNAVGTFTRQGELTLLKGYLLDVTDQKNLEEQLRQAQ
KMEAVGRLAGGIAHDFNNLLTAITGYADTLESNLKGEDALRKNAEEIRRAAERAAALTSQ
LLAFSRKQVLRPRVLDLRDVVARMEEMLRRLIGENIALCTAVDEGLWRVKADQGQIEQVI
MNLVVNARDAMPQGGRLLIEARNVELDGSYVSRHMAVNPGSYVLLAVSDDGMGMSSETIS
HLFEPFYTTKEQGKGTGLGLATVYGIVTQSGGHIWVYSEPGEGTTFKIYLPRVEGEVEEV
LPARQEAIPVEGSETILLVEDDDLVRNMICETLKQNGYTMLNAASGDEALNLCGDHEGVI
DLLVTDVVMPGMNGRELAERLSTAYPRLKTLFISGYTDHGIVHNGILDPETDFLQKPFKL
DALARKIRQIMDS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccatcttcattatggcattcgtcctggcatcttgtctaacaggagcttatttt
ctgcacaaaccgattcgaatattaaatcgcgataaggtcctctacctgttcggggtcgcc
gccctgctgcttggattgaggcttttccaagtgctctgggaacggggtccgggacaacct
cgtttctccgatccgattttcggctggaatgaacccgtttttctttccgccgcaatcatg
gtattagtggtttgcgcgctgctcgtgccgattgtgatccgccgcggggaggaacggaaa
tcggccgggaagggcgcggaggaaacggagcggcttctggcggcggtgctttccgcatcc
cccgtcggtttctgcctgctcaaggaagacatcatccaatgggtgaatcaggctctgtgc
gacatactcggccgcggtgccgaggaactcgaaggccgcagcatcgccgggctttatgct
gaagagggcgagcacgagcgggtgaagacgcaactgctcaacgggtgcacctcttcggag
ggcgccggggcagccgcgtgttggattcgcgggaacggctccacgctgcattgtcttctg
caggccgctcccacgggcatgagcaccctcgatggaaaacgtgtcctggccgtgatggac
acgtcggaattgaaacgaaaggaagaggctttactcgaaagcgaggaacgctaccgcaga
tttttcgaggaagacctcgctgcggcgtacgtttcgaccccggacggccggttgttgtcc
tgcaatccggcatttgttagaatattcggttttccatcggttgaggcggcgatcaccagt
gacctcaactttctccagccggcgtccgattccgaagctggtgttgtcgaactcatcagg
aaacggaagaagatcgagaattatcgatgtgagctcaaccgttgcgacgggaagagagtg
cacgtcgtgatgaacgccgtggggacgttcactcggcaaggcgagttgactctcctcaaa
ggctacctgctggatgtgacggatcagaagaacctcgaagaacaattgcgccaagcccag
aagatggaagccgtggggcggcttgcaggagggatcgcgcacgatttcaacaatctgctc
acggccattaccggctacgccgatacgttggaatcaaacctcaaaggggaagacgctttg
agaaagaatgcggaagaaatcagaagggctgcggaaagggccgccgccttgacgagccag
ctcctggccttcagccgcaagcaggttctgaggccgagagtactggaccttcgtgacgtt
gtcgcacgcatggaggaaatgcttcgccgtctgatcggggaaaacatcgcgctttgcacg
gctgtcgacgagggactctggcgcgtgaaagccgaccagggacagattgaacaggtcatc
atgaacctggtcgtgaatgcccgggatgccatgccccagggaggccggctgctgatcgaa
gcccgcaacgtcgagctcgacggcagctacgtcagcagacacatggccgtgaaccccggt
tcttacgtgctgctcgccgtgagcgacgacggcatgggcatgagcagtgaaaccatttct
cacctgttcgagcccttttataccaccaaggaacagggaaagggaacggggctgggactg
gcaacggtttacggaatcgtgactcagagcggcgggcacatctgggtgtacagtgaaccg
ggagaaggcacgacattcaaaatctatctgccccgggtggaaggcgaggtcgaagaagtg
ctgccggcccggcaggaagctattccggtcgaaggcagcgagactatcctgctggtggaa
gacgatgatctggtgaggaacatgatctgtgaaaccttgaaacagaatggctacaccatg
ctcaacgccgccagtggagatgaagcgctgaacctgtgcggcgatcacgagggggtgatc
gatctgctggtcaccgatgtggtcatgcccggaatgaacgggcgggaactggctgaacgg
ttgtcgaccgcatacccgcgtctgaaaacgcttttcatctcgggctacaccgaccacggc
atcgtgcacaacggcattctcgacccggagaccgattttctgcaaaaacccttcaagttg
gatgcgctggcaaggaaaatccgtcagatcatggacagctga
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