Syntrophobacter fumaroxidans: Sfum_3302
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Entry
Sfum_3302 CDS
T00418
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sfum_3302
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfu01007
]
Sfum_3302
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfu03016
]
Sfum_3302
03029 Mitochondrial biogenesis [BR:
sfu03029
]
Sfum_3302
Enzymes [BR:
sfu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Sfum_3302
Amino acid related enzymes [BR:
sfu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Sfum_3302
Transfer RNA biogenesis [BR:
sfu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sfum_3302
Prokaryotic type
Other AARSs
Sfum_3302
Mitochondrial biogenesis [BR:
sfu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Sfum_3302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABK18975
UniProt:
A0LNH3
LinkDB
All DBs
Position
complement(4042391..4044232)
Genome browser
AA seq
613 aa
AA seq
DB search
MEPQTDMQPDSPPETAIDLDDLGDWRKTHSCNSLGRGHVGETVVLMGWVQRRRDHGGLIF
VDLRDREGLTQVVFDPQFDAVAHEHAHSLRSEYVIAVTGTVRPRPEGMTNPRLVTGEIEV
ITRELKILNSSKTPPFHVEDDVEASENIRLRYRYIDLRRPRMFHNLLLRHRAVQLTREYF
NGAGFLEVETPVLTKSTPEGARDYLVPSRVNPGKFYALPQSPQLFKQILMVAGFERYYQI
VKCFRDEDLRADRQPEFTQLDLEMSFVNEEHIYELIESWIRLLMKELLGVEMAPPFPRMS
YAEAMRLYGTDRPDTRFGLLLTDVTDIVADSELRVFRQAVERNGIVKALRVPGGGGLSRK
DLDDLTEYVKIFGAQGMAWIRIQPEGWQSPIAKFLQESVRERLAERLEIENGDIVMFLAD
QGKVVNDALGNLRVRLGNQLELIDPGSYNFVWVSHFPLLEWDAEEKRYTAVHHPFTSPIE
EDVPLLREHPEQVRSRAYDLVLNGIEIGGGSIRIHRQELQELVFGALGIGREEAAEKFGF
LLEALQYGAPPHGGIAFGVDRLVMLLSGSTSIRDVIAFPKTQKATCLMSGAPSEPELRQL
LELCVRVESERRS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgcaaacggacatgcaaccggacagcccgccggaaaccgcgatcgacctggac
gatctgggagactggcgcaagactcattcgtgcaacagcctgggacgcgggcacgtgggt
gaaaccgtggtcctgatgggatgggtgcaacgcaggcgcgaccacggcgggttgattttc
gtggacctgcgagaccgggagggactcacgcaggtggtcttcgaccctcagttcgacgcc
gtggcccacgaacacgcgcattccctgcgcagcgaatacgtcatcgccgtcaccggcacg
gtgaggccgcgtccggaaggaatgaccaatcccaggctggttacgggagaaatcgaggtg
atcaccagggaactgaagatcctcaattcgtccaagacccctccttttcatgtcgaggac
gacgtcgaagccagcgaaaatatccgcctgcggtaccgttatatcgatctgcgccgtcca
aggatgttccacaacctccttttgcggcaccgggccgtccaactcacccgggaatacttc
aacggggcgggcttcctggaagtggaaaccccggtcctgacgaagagcacgcctgaaggg
gcaagagattacctcgtgccgagtcgcgtcaatccgggcaagttctacgccttgccccag
tcgcctcagcttttcaagcagatcctcatggtggcgggtttcgagcgttactaccagatc
gtgaagtgttttcgggatgaggacctgagagcggatcgtcaaccggaattcacccagctc
gaccttgaaatgtccttcgtgaatgaagaacatatctacgaactcatcgaaagctggata
cggctcctgatgaaagagctgctgggggtggagatggcgccgccgtttccgcgcatgtcc
tatgcggaggccatgcgattgtatggaaccgatcgaccggacacgcgcttcggcttgttg
ttgacggacgtcaccgacatcgtggcggattccgagctgcgcgtgttccggcaggcggtc
gagcgaaacgggatcgtgaaggcgctccgggtgcccggagggggaggtctgtctcgaaag
gatctggacgatctgaccgaatacgtgaaaatattcggtgcccagggcatggcctggatc
aggattcagccggagggatggcaatccccgatcgccaagtttctccaggagagcgtacgc
gaacgcctggcggaaaggctggaaatcgagaacggcgacatcgtcatgttccttgccgac
cagggcaaggtggtcaacgacgcattgggaaatctgcgggttcggctcggaaatcagctc
gaactcattgaccccgggagctataattttgtttgggtgtcgcatttcccgctgctcgaa
tgggatgcggaggagaagcgttacacggcggtccatcacccgttcacgtcgccgatcgag
gaagacgtcccgcttctgcgggaacatcccgagcaggtgaggagccgggcctacgacctg
gtgctcaatggtatcgaaatcgggggcgggagcatccgcatccatcgccaggagctccag
gagcttgtgttcggtgcgctgggcatcggtcgcgaggaggccgcggagaaattcggcttt
cttctggaagcgcttcagtacggggcgccgccccacggtgggatcgcattcggcgtggac
aggctggtcatgctgttgagcggttccacttcgatccgggacgtgatcgcttttccgaag
acgcagaaggcgacctgcctgatgagcggggcgccgtcggagccggagttgcggcaactc
ctggagttgtgcgtgagggttgaaagcgaacggaggagttga
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