Syntrophobacter fumaroxidans: Sfum_3545
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Entry
Sfum_3545 CDS
T00418
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sfum_3545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfu02000
]
Sfum_3545
Transporters [BR:
sfu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Sfum_3545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_16
AAA
NB-ARC
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABK19215
UniProt:
A0LP63
LinkDB
All DBs
Position
complement(4338637..4339620)
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AA seq
327 aa
AA seq
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MDQPGANRVLLEVDDLRTHFFTERGVAKAVDGVGLRLDEGRILGIVGESGCGKSVTAHSI
LRLVPSPPGRIVGGAVRFNGKDLLALSEKEMQEVRGREISMIFQEPMTSLNPVFRVEDQI
VEVLQRHMALSRRDSLDRTLELLKMVGIRSPEIHMKDYPHQMSGGMRQRVMIAMALACSP
RLIIADEPTTALDVTIQAQILDLLRELREKTRTAILLITHDLGVIANLAEQVLVMYTGRV
VEEAPVRALFEFPLHPYTRGLMRSIPGRAAGGEKRLEAIPGVVPNLLELPRGCKFNTRCP
SAFDRCFEEEPGLLHPEGGHPVRCWLY
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtggatcagccgggcgcgaatcgggttctcctggaggtcgacgaccttcgaacgcatttc
ttcaccgaaaggggtgttgccaaggccgtcgacggcgtgggtttgcgcctcgatgaaggc
cggatactcggcatcgtgggtgaatcgggatgcggcaagagcgtcaccgcccattccatc
ctgcgcctcgttccctccccgcccgggcggatcgtcgggggcgcggtccggttcaacggc
aaggacctgctcgcgctgagcgaaaaggagatgcaggaagtccggggcagggagatttcc
atgatcttccaggagcccatgacctccctcaacccggtttttcgcgtggaagatcagatc
gtcgaagtcctgcagcgccacatggcgctctcccggcgggactccctggacaggacgctg
gagctgctgaaaatggtcggcatccgctctcccgagatccacatgaaagactatccgcac
cagatgagcggagggatgcggcagcgcgtcatgattgccatggccctggcgtgcagccca
aggctgatcatcgcggacgagcccaccacggccctggacgtgaccatccaggcgcagatc
ctcgacctgctcagagagctccgggagaagacccgaacggccatcctgctcatcacgcac
gacctgggcgtcattgcgaacctggccgagcaggtcctcgtgatgtacacgggccgcgtc
gtggaagaagcccccgtgagggcccttttcgagtttcccttgcatccttatacccggggc
ctgatgcgctcgatcccgggaagggccgccggcggggaaaagcggctggaagcgattccg
ggcgtggtgccgaacctcctggaactgccgcgcggctgcaagttcaacacccgctgcccg
tctgccttcgatcgctgtttcgaggaagaaccgggcctgctgcaccccgaaggcgggcac
cccgtccggtgctggctctattga
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